Detailed information NTG0565569

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LU695_RS20955
• Genome accession: NZ_CP092500
• Coordinates: 4217945..4218970 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain A30
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4212945..4223970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LU695_RS20935 (LU695_20915)	metJ	4214006..4214323 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LU695_RS20940 (LU695_20920)	yiiX	4214507..4215115 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
LU695_RS20945 (LU695_20925)	rpmE	4215176..4215388 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LU695_RS20950 (LU695_20930)	priA	4215591..4217789 (+)	2199	WP_258314036.1	primosomal protein N'	Machinery gene
LU695_RS20955 (LU695_20935)	cytR	4217945..4218970 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LU695_RS20960 (LU695_20940)	ftsN	4219062..4220021 (+)	960	WP_000068834.1	cell division protein FtsN	-
LU695_RS20965 (LU695_20945)	hslV	4220114..4220644 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LU695_RS20970 (LU695_20950)	hslU	4220654..4221985 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LU695_RS20975 (LU695_20955)	menA	4222052..4222978 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LU695_RS20980 (LU695_20960)	rraA	4223071..4223556 (+)	486	WP_258314037.1	ribonuclease E activity regulator RraA	-
LU695_RS20985 (LU695_20965)	zapB	4223641..4223886 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=565569 LU695_RS20955 WP_000644904.1 4217945..4218970(+) (cytR) [Escherichia coli strain A30]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=565569 LU695_RS20955 WP_000644904.1 4217945..4218970(+) (cytR) [Escherichia coli strain A30]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628