Detailed information NTG0565488

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KIH05_RS09865
• Genome accession: NZ_CP074585
• Coordinates: 2032362..2033063 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain ATCC 19606
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2027362..2038063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH05_RS09830 (KIH05_09805)	kdsB	2027885..2028646 (+)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KIH05_RS09835 (KIH05_09810)	-	2028658..2029638 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
KIH05_RS09840 (KIH05_09815)	-	2029650..2029991 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KIH05_RS09845 (KIH05_09820)	-	2030009..2030782 (+)	774	WP_000497298.1	TatD family hydrolase	-
KIH05_RS09850 (KIH05_09825)	-	2030820..2031428 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KIH05_RS09855 (KIH05_09830)	-	2031438..2031992 (+)	555	WP_000841370.1	type II secretion system protein	-
KIH05_RS09860 (KIH05_09835)	xcpV	2031982..2032362 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KIH05_RS09865 (KIH05_09840)	xcpW	2032362..2033063 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KIH05_RS09870 (KIH05_09845)	gspK	2033063..2034022 (+)	960	WP_000301461.1	type II secretion system minor pseudopilin GspK	-
KIH05_RS09875 (KIH05_09850)	-	2034252..2034848 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
KIH05_RS09880 (KIH05_09855)	ung	2034899..2035612 (+)	714	WP_001177525.1	uracil-DNA glycosylase	-
KIH05_RS09885 (KIH05_09860)	-	2035609..2036733 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KIH05_RS09890 (KIH05_09865)	tadA	2036740..2037243 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
KIH05_RS09895 (KIH05_09870)	-	2037313..2037756 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=565488 KIH05_RS09865 WP_000594572.1 2032362..2033063(+) (xcpW) [Acinetobacter baumannii strain ATCC 19606]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=565488 KIH05_RS09865 WP_000594572.1 2032362..2033063(+) (xcpW) [Acinetobacter baumannii strain ATCC 19606]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
TGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAACTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991