Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KIJ47_RS11060 Genome accession   NZ_CP074584
Coordinates   2308056..2308682 (-) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain L1 delta-T1RM     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2303056..2313682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIJ47_RS11045 (KIJ47_11040) helD 2303293..2305347 (-) 2055 WP_038417556.1 DNA helicase IV -
  KIJ47_RS11050 (KIJ47_11045) - 2305471..2305917 (+) 447 WP_038417558.1 YccF domain-containing protein -
  KIJ47_RS11055 (KIJ47_11050) yccS 2305937..2308099 (+) 2163 WP_038417559.1 YccS family putative transporter -
  KIJ47_RS11060 (KIJ47_11055) sxy/tfoX 2308056..2308682 (-) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  KIJ47_RS11065 (KIJ47_11060) sulA 2308900..2309409 (+) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  KIJ47_RS11070 (KIJ47_11065) ompA 2309763..2310818 (+) 1056 WP_115504044.1 porin OmpA -
  KIJ47_RS11075 (KIJ47_11070) matP 2310882..2311334 (-) 453 WP_038417562.1 macrodomain Ter protein MatP -
  KIJ47_RS11080 (KIJ47_11075) - 2311521..2313281 (+) 1761 WP_023311027.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=565452 KIJ47_RS11060 WP_023311030.1 2308056..2308682(-) (sxy/tfoX) [Enterobacter asburiae strain L1 delta-T1RM]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=565452 KIJ47_RS11060 WP_023311030.1 2308056..2308682(-) (sxy/tfoX) [Enterobacter asburiae strain L1 delta-T1RM]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGACTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTTTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTACATGAGGCGGCACTCCCGGCGGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567