Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKD48_RS08155 Genome accession   NZ_CP092475
Coordinates   1580346..1581497 (-) Length   383 a.a.
NCBI ID   WP_000020346.1    Uniprot ID   -
Organism   Staphylococcus aureus strain P5     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1575346..1586497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKD48_RS08140 - 1575766..1576971 (+) 1206 Protein_1574 transposase -
  MKD48_RS08145 rny 1577225..1578784 (-) 1560 WP_001050913.1 ribonuclease Y -
  MKD48_RS08150 recA 1579138..1580181 (-) 1044 WP_000368167.1 recombinase RecA Machinery gene
  MKD48_RS08155 cinA 1580346..1581497 (-) 1152 WP_000020346.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  MKD48_RS08160 pgsA 1581722..1582300 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKD48_RS08165 - 1582334..1582726 (-) 393 WP_000859443.1 RodZ family helix-turn-helix domain-containing protein -
  MKD48_RS08170 - 1582745..1583572 (-) 828 WP_000214890.1 YmfK family protein -
  MKD48_RS08175 - 1583677..1584381 (-) 705 WP_000646226.1 SDR family NAD(P)-dependent oxidoreductase -
  MKD48_RS08180 - 1584381..1585667 (-) 1287 WP_000664770.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 43237.52 Da        Isoelectric Point: 6.1914

>NTDB_id=565392 MKD48_RS08155 WP_000020346.1 1580346..1581497(-) (cinA) [Staphylococcus aureus strain P5]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=565392 MKD48_RS08155 WP_000020346.1 1580346..1581497(-) (cinA) [Staphylococcus aureus strain P5]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA

Domains

Predicted by InterProScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(4-164)

Damage-inducible protein CinA KH domain (CinA_KH)

(177-250)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433