Detailed information NTG0565340

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KIH94_RS18710
• Genome accession: NZ_CP074571
• Coordinates: 3654962..3656107 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BYS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3649962..3661107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH94_RS18690 (KIH94_18690)	albF	3649980..3651260 (+)	1281	WP_015483836.1	pitrilysin family protein	-
KIH94_RS18695 (KIH94_18695)	albG	3651257..3651958 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KIH94_RS18700 (KIH94_18700)	ywhL	3651964..3653337 (-)	1374	WP_015483837.1	YncE family protein	-
KIH94_RS18705 (KIH94_18705)	ywhK	3653377..3654732 (-)	1356	WP_015384933.1	YncE family protein	-
KIH94_RS20900	-	3654729..3654959 (-)	231	WP_015483838.1	hypothetical protein	-
KIH94_RS18710 (KIH94_18710)	rapF	3654962..3656107 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
KIH94_RS18715 (KIH94_18715)	phrF	3656091..3656210 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KIH94_RS18720 (KIH94_18720)	-	3656438..3656914 (+)	477	WP_015384936.1	hypothetical protein	-
KIH94_RS18725 (KIH94_18725)	-	3657162..3657860 (+)	699	WP_250629551.1	hypothetical protein	-
KIH94_RS18730 (KIH94_18730)	-	3659336..3659983 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
KIH94_RS20780	-	3659976..3660320 (+)	345	WP_250629552.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=565340 KIH94_RS18710 WP_015384935.1 3654962..3656107(+) (rapF) [Bacillus subtilis strain BYS2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=565340 KIH94_RS18710 WP_015384935.1 3654962..3656107(+) (rapF) [Bacillus subtilis strain BYS2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575