Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KIH94_RS06215 Genome accession   NZ_CP074571
Coordinates   1199639..1200760 (+) Length   373 a.a.
NCBI ID   WP_236822450.1    Uniprot ID   -
Organism   Bacillus subtilis strain BYS2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1194639..1205760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH94_RS06180 (KIH94_06180) yjbB 1195284..1196501 (+) 1218 WP_080030656.1 MFS transporter -
  KIH94_RS06185 (KIH94_06185) yjbC 1196665..1197240 (+) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  KIH94_RS06190 (KIH94_06190) spx 1197421..1197816 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  KIH94_RS06195 (KIH94_06195) yjbE 1197859..1198515 (-) 657 WP_015483086.1 TerC family protein -
  KIH94_RS06200 (KIH94_06200) - 1198685..1198825 (+) 141 WP_119122854.1 hypothetical protein -
  KIH94_RS06205 (KIH94_06205) mecA 1198792..1199448 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  KIH94_RS06210 (KIH94_06210) - 1199451..1199565 (-) 115 Protein_1164 hypothetical protein -
  KIH94_RS06215 (KIH94_06215) coiA 1199639..1200760 (+) 1122 WP_236822450.1 competence protein CoiA Machinery gene
  KIH94_RS06220 (KIH94_06220) pepF 1200990..1202819 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  KIH94_RS06225 (KIH94_06225) - 1202857..1203024 (-) 168 WP_003244944.1 hypothetical protein -
  KIH94_RS06230 (KIH94_06230) spxH 1203339..1204238 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KIH94_RS06235 (KIH94_06235) bhbI 1204235..1204633 (-) 399 WP_015383357.1 thiol management oxidoreductase component -
  KIH94_RS06240 (KIH94_06240) cwlQ 1204888..1205613 (-) 726 WP_015383358.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43750.82 Da        Isoelectric Point: 10.0038

>NTDB_id=565293 KIH94_RS06215 WP_236822450.1 1199639..1200760(+) (coiA) [Bacillus subtilis strain BYS2]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPNVFQKLTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVDDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTPFSFLPTEVFVPVSKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPASGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=565293 KIH94_RS06215 WP_236822450.1 1199639..1200760(+) (coiA) [Bacillus subtilis strain BYS2]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGATATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACCATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCACCAAATGTCTTTCAGAAGCTGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTTAGCCACATCATACCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGTAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCACATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGTAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAAGTGGCATACACTCAATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.319

100

0.973