Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KIH94_RS04570 Genome accession   NZ_CP074571
Coordinates   895711..896502 (+) Length   263 a.a.
NCBI ID   WP_015383146.1    Uniprot ID   -
Organism   Bacillus subtilis strain BYS2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 890711..901502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH94_RS04540 (KIH94_04540) sxzA 891550..892581 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  KIH94_RS04545 (KIH94_04545) yfhB 892696..893577 (+) 882 WP_015383143.1 PhzF family phenazine biosynthesis isomerase -
  KIH94_RS04550 (KIH94_04550) yfhC 893665..894249 (+) 585 WP_015482973.1 nitroreductase -
  KIH94_RS04555 (KIH94_04555) yfhD 894288..894479 (-) 192 WP_003233561.1 YfhD family protein -
  KIH94_RS04560 (KIH94_04560) yfhE 894546..894656 (-) 111 WP_003223230.1 YfhE family protein -
  KIH94_RS04565 (KIH94_04565) yfhF 894711..895622 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  KIH94_RS04570 (KIH94_04570) recX 895711..896502 (+) 792 WP_015383146.1 recombination regulator RecX Regulator
  KIH94_RS04575 (KIH94_04575) yfhH 896511..896825 (+) 315 WP_015383147.1 YfhH family protein -
  KIH94_RS04580 (KIH94_04580) yfhI 896968..898161 (+) 1194 WP_015482975.1 MFS transporter -
  KIH94_RS04585 (KIH94_04585) sspK 898193..898345 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KIH94_RS04590 (KIH94_04590) yfhJ 898470..898739 (+) 270 WP_003243789.1 YfhJ family protein -
  KIH94_RS04595 (KIH94_04595) yfhK 898884..899402 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  KIH94_RS04600 (KIH94_04600) spdL 899487..899819 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  KIH94_RS04605 (KIH94_04605) ephM 899806..900666 (+) 861 WP_015383151.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30898.10 Da        Isoelectric Point: 6.6690

>NTDB_id=565280 KIH94_RS04570 WP_015383146.1 895711..896502(+) (recX) [Bacillus subtilis strain BYS2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EEHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=565280 KIH94_RS04570 WP_015383146.1 895711..896502(+) (recX) [Bacillus subtilis strain BYS2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGAGCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

100

0.992