Detailed information NTG0565250

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MJJ13_RS21300
• Genome accession: NZ_CP092449
• Coordinates: 4387324..4388349 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate TKEC21-17
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4382324..4393349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJJ13_RS21275 (MJJ13_21275)	metJ	4382761..4383078 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MJJ13_RS21280 (MJJ13_21280)	yiiX	4383262..4383870 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
MJJ13_RS21285 (MJJ13_21285)	-	4383877..4384500 (+)	624	WP_000720774.1	TIGR02117 family protein	-
MJJ13_RS21290 (MJJ13_21290)	rpmE	4384555..4384767 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MJJ13_RS21295 (MJJ13_21295)	priA	4384970..4387168 (+)	2199	WP_239812919.1	primosomal protein N'	Machinery gene
MJJ13_RS21300 (MJJ13_21300)	cytR	4387324..4388349 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MJJ13_RS21305 (MJJ13_21305)	ftsN	4388441..4389400 (+)	960	WP_000068828.1	cell division protein FtsN	-
MJJ13_RS21310 (MJJ13_21310)	hslV	4389493..4390023 (+)	531	WP_032247388.1	ATP-dependent protease subunit HslV	-
MJJ13_RS21315 (MJJ13_21315)	hslU	4390033..4391364 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MJJ13_RS21320 (MJJ13_21320)	menA	4391431..4392357 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MJJ13_RS21325 (MJJ13_21325)	rraA	4392450..4392935 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MJJ13_RS21330 (MJJ13_21330)	zapB	4393020..4393265 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=565250 MJJ13_RS21300 WP_000644904.1 4387324..4388349(+) (cytR) [Escherichia coli isolate TKEC21-17]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=565250 MJJ13_RS21300 WP_000644904.1 4387324..4388349(+) (cytR) [Escherichia coli isolate TKEC21-17]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628