Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LXM97_RS02100 Genome accession   NZ_CP092447
Coordinates   462791..463594 (+) Length   267 a.a.
NCBI ID   WP_001134191.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SYN     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 457791..468594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM97_RS02080 (LXM97_02080) - 459337..460674 (+) 1338 WP_000812840.1 aminotransferase class V-fold PLP-dependent enzyme -
  LXM97_RS02085 (LXM97_02085) tmk 460676..461293 (+) 618 WP_001272126.1 dTMP kinase -
  LXM97_RS02090 (LXM97_02090) - 461321..461650 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  LXM97_RS02095 (LXM97_02095) - 461864..462790 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  LXM97_RS02100 (LXM97_02100) yaaT 462791..463594 (+) 804 WP_001134191.1 stage 0 sporulation family protein Regulator
  LXM97_RS02105 (LXM97_02105) yabA 463611..463958 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  LXM97_RS02110 (LXM97_02110) - 464232..464957 (+) 726 WP_000910687.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  LXM97_RS02115 (LXM97_02115) - 464950..465198 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  LXM97_RS02120 (LXM97_02120) rsmI 465200..466039 (+) 840 WP_000279919.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LXM97_RS02125 (LXM97_02125) metG 466324..468297 (+) 1974 WP_001051120.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5759

>NTDB_id=565099 LXM97_RS02100 WP_001134191.1 462791..463594(+) (yaaT) [Staphylococcus aureus strain SYN]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=565099 LXM97_RS02100 WP_001134191.1 462791..463594(+) (yaaT) [Staphylococcus aureus strain SYN]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACACGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618