Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SITYG_RS02975 Genome accession   NZ_AP014880
Coordinates   576738..577424 (+) Length   228 a.a.
NCBI ID   WP_003073462.1    Uniprot ID   A0ABS3GAQ5
Organism   Streptococcus intermedius strain TYG1620     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 571738..582424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SITYG_RS02950 (SITYG_05650) - 571870..572502 (+) 633 WP_096362622.1 DUF421 domain-containing protein -
  SITYG_RS02960 (SITYG_05660) - 572871..573131 (-) 261 WP_003043441.1 SemiSWEET family transporter -
  SITYG_RS02965 (SITYG_05670) metG 573378..575375 (+) 1998 WP_096362623.1 methionine--tRNA ligase -
  SITYG_RS02970 (SITYG_05680) - 575465..576646 (-) 1182 WP_096362624.1 DUF2974 domain-containing protein -
  SITYG_RS02975 (SITYG_05690) braR 576738..577424 (+) 687 WP_003073462.1 response regulator transcription factor Regulator
  SITYG_RS02980 (SITYG_05700) - 577408..578388 (+) 981 WP_003078184.1 sensor histidine kinase -
  SITYG_RS02985 (SITYG_05710) - 578511..579269 (+) 759 WP_096362625.1 TraX family protein -
  SITYG_RS02990 (SITYG_05730) - 579487..580266 (+) 780 WP_009568230.1 ABC transporter ATP-binding protein -
  SITYG_RS02995 (SITYG_05740) - 580247..582226 (+) 1980 WP_096362626.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26383.70 Da        Isoelectric Point: 5.0048

>NTDB_id=56507 SITYG_RS02975 WP_003073462.1 576738..577424(+) (braR) [Streptococcus intermedius strain TYG1620]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVITLTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYRLINGTSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=56507 SITYG_RS02975 WP_003073462.1 576738..577424(+) (braR) [Streptococcus intermedius strain TYG1620]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGTTGACGATTTTTGTTAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTTTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGCTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTACGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTTTGGAATAGTGATTTCTTTAT
TGATGATAATACCTTATCTGTGAATGTTGCACGGCTGCGCAAGAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGGTATAGGTTAATCAATGGAACATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.545

96.491

0.478

Multiple sequence alignment