Detailed information NTG0565005

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MID01_RS08475
• Genome accession: NZ_CP092369
• Coordinates: 1631071..1632060 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain ZW
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1626071..1637060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MID01_RS08460 (MID01_08460)	acpP	1626268..1626501 (+)	234	WP_003154310.1	acyl carrier protein	-
MID01_RS08465 (MID01_08465)	rncS	1626641..1627390 (+)	750	WP_003232030.1	ribonuclease III	-
MID01_RS08470 (MID01_08470)	smc	1627491..1631051 (+)	3561	WP_128472225.1	chromosome segregation protein SMC	-
MID01_RS08475 (MID01_08475)	pilA	1631071..1632060 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
MID01_RS08480 (MID01_08480)	ylqB	1632097..1632582 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
MID01_RS08485 (MID01_08485)	ylxM	1632759..1633091 (+)	333	WP_003238590.1	putative DNA-binding protein	-
MID01_RS08490 (MID01_08490)	ffh	1633105..1634445 (+)	1341	WP_014113771.1	signal recognition particle protein	-
MID01_RS08495 (MID01_08495)	rpsP	1634551..1634823 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
MID01_RS08500 (MID01_08500)	ylqC	1634823..1635068 (+)	246	WP_041850835.1	KH domain-containing protein	-
MID01_RS08505 (MID01_08505)	ylqD	1635190..1635576 (+)	387	WP_014476793.1	YlqD family protein	-
MID01_RS08510 (MID01_08510)	rimM	1635581..1636105 (+)	525	WP_041850834.1	ribosome maturation factor RimM	-
MID01_RS08515 (MID01_08515)	trmD	1636102..1636833 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=565005 MID01_RS08475 WP_003232026.1 1631071..1632060(+) (pilA) [Bacillus subtilis strain ZW]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=565005 MID01_RS08475 WP_003232026.1 1631071..1632060(+) (pilA) [Bacillus subtilis strain ZW]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401