Detailed information NTG0564982

Bioinformatically predicted

Overview

• Name: sxy/tfoX
• Type: Regulator
• Locus tag: KHV89_RS15820
• Genome accession: NZ_CP074446
• Coordinates: 3343455..3344078 (-)
• Length: 207 a.a.
• NCBI ID: WP_162870419.1
• Uniprot ID: -
• Organism: Klebsiella aerogenes strain S2_CRE2
• Function: positive regulator of competence gene (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	3335266..3349761	3343455..3344078	within	0

Gene organization within MGE regions

Location: 3335266..3349761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHV89_RS24465	-	3335266..3337017 (-)	1752	WP_416259253.1	BapA/Bap/LapF family prefix-like domain-containing protein	-
KHV89_RS15795 (KHV89_15745)	-	3337630..3338043 (-)	414	WP_020079236.1	CoA-binding protein	-
KHV89_RS15800 (KHV89_15750)	mgsA	3338201..3338659 (+)	459	WP_015367424.1	methylglyoxal synthase	-
KHV89_RS15805 (KHV89_15755)	helD	3338690..3340744 (-)	2055	WP_020079237.1	DNA helicase IV	-
KHV89_RS15810 (KHV89_15760)	-	3340868..3341314 (+)	447	WP_020079238.1	YccF domain-containing protein	-
KHV89_RS15815 (KHV89_15765)	yccS	3341332..3343467 (+)	2136	WP_020079239.1	YccS family putative transporter	-
KHV89_RS15820 (KHV89_15770)	sxy/tfoX	3343455..3344078 (-)	624	WP_162870419.1	TfoX/Sxy family DNA transformation protein	Regulator
KHV89_RS15825 (KHV89_15775)	sulA	3344528..3345037 (+)	510	WP_020079240.1	SOS-induced cell division inhibitor SulA	-
KHV89_RS15830 (KHV89_15780)	ompA	3345390..3346442 (+)	1053	WP_080473199.1	porin OmpA	-
KHV89_RS15835 (KHV89_15785)	matP	3346534..3346986 (-)	453	WP_015367432.1	macrodomain Ter protein MatP	-
KHV89_RS15840 (KHV89_15790)	-	3347172..3348929 (+)	1758	WP_058676261.1	AAA family ATPase	-
KHV89_RS15845 (KHV89_15795)	fabA	3348999..3349517 (+)	519	WP_015704907.1	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	-
KHV89_RS15850 (KHV89_15800)	rmf	3349594..3349761 (-)	168	WP_015704906.1	ribosome modulation factor	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 23638.36 Da
• Isoelectric Point: 9.9634

>NTDB_id=564982 KHV89_RS15820 WP_162870419.1 3343455..3344078(-) (sxy/tfoX) [Klebsiella aerogenes strain S2_CRE2]
MKKISKLRFLQFQECLSPLGKISSRPLFGGYSLAIENTVFAMVAEGEIYLRVCEQSASYRVEHHSPMLMMRKNGRPVALK
YYRIDEALWQDSKMLFHLSQLSLYSARSEKQHQRDSGRLKNLPNISFHMELMLIHAGITDVKMLRTLGAEKSWLKLREHN
KGISINVLESLAGAIAGIHSAALPAQRRQELREWANTQGYSVEDYSG

Nucleotide

• Length: 624 bp

>NTDB_id=564982 KHV89_RS15820 WP_162870419.1 3343455..3344078(-) (sxy/tfoX) [Klebsiella aerogenes strain S2_CRE2]
ATGAAGAAAATTTCAAAATTACGGTTCCTCCAGTTTCAGGAGTGCCTTTCCCCCTTAGGTAAAATCAGTAGCCGGCCTTT
ATTCGGCGGGTATAGTCTGGCGATTGAAAATACCGTATTCGCCATGGTGGCTGAGGGCGAAATCTATCTTAGGGTTTGCG
AACAAAGCGCCTCTTATCGGGTTGAACATCACAGCCCGATGCTGATGATGCGCAAGAATGGCCGGCCAGTGGCCTTAAAG
TATTACCGGATAGATGAAGCACTATGGCAGGACAGTAAAATGCTGTTTCACCTATCGCAGCTGTCATTGTATTCGGCGCG
AAGCGAAAAGCAGCATCAGCGTGATTCCGGCAGACTAAAGAATTTGCCTAATATCAGCTTCCATATGGAGTTGATGTTGA
TCCATGCCGGAATAACCGATGTGAAAATGCTGCGTACACTCGGGGCGGAAAAGAGCTGGTTAAAATTGAGAGAGCATAAT
AAAGGAATATCAATCAATGTCCTTGAGTCCCTGGCGGGCGCGATTGCCGGCATTCATTCCGCCGCGCTCCCGGCGCAGCG
GCGCCAGGAGCTACGGGAGTGGGCTAATACACAAGGATACAGCGTGGAGGATTATTCCGGTTGA

Domains

Predicted by InterproScan.

• TfoX N-terminal domain (TfoX_N) (14-103)

• TfoX C-terminal domain (TfoX_C) (117-194)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sxy/tfoX	Escherichia coli BW25113 strain K-12	51.777	95.169	0.493