Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AH5611_RS06260 Genome accession   NZ_CP092055
Coordinates   1293277..1293900 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain USA600     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1288277..1298900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AH5611_RS06235 (AH5611_001208) rpmG 1289854..1290003 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  AH5611_RS06240 (AH5611_001209) rpsN 1290456..1290725 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  AH5611_RS06245 (AH5611_001210) guaC 1290882..1291859 (+) 978 WP_000688134.1 GMP reductase -
  AH5611_RS06255 (AH5611_001211) - 1291881..1292897 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  AH5611_RS06260 (AH5611_001212) dinR/lexA 1293277..1293900 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  AH5611_RS06265 (AH5611_001213) sosA 1294043..1294276 (+) 234 WP_000499648.1 DNA damage-induced cell division inhibitor SosA -
  AH5611_RS06270 (AH5611_001214) - 1294412..1294651 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  AH5611_RS06275 (AH5611_001215) recP/tkt 1294772..1296760 (+) 1989 WP_000481440.1 transketolase Machinery gene
  AH5611_RS06280 (AH5611_001216) - 1297038..1297280 (+) 243 WP_000246909.1 YneF family protein -
  AH5611_RS06285 - 1297267..1297365 (+) 99 WP_001789897.1 hypothetical protein -
  AH5611_RS06290 (AH5611_001217) - 1297459..1297926 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=564809 AH5611_RS06260 WP_001208755.1 1293277..1293900(-) (dinR/lexA) [Staphylococcus aureus strain USA600]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=564809 AH5611_RS06260 WP_001208755.1 1293277..1293900(-) (dinR/lexA) [Staphylococcus aureus strain USA600]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGAGAAATTGGAGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGCGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657