Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MCU78_RS13755 Genome accession   NZ_CP092051
Coordinates   3238063..3239796 (-) Length   577 a.a.
NCBI ID   WP_185941580.1    Uniprot ID   -
Organism   Streptomyces sp. TYQ1024     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3233063..3244796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MCU78_RS13740 (MCU78_13740) - 3233819..3234622 (-) 804 WP_185941579.1 response regulator transcription factor -
  MCU78_RS13745 (MCU78_13745) - 3234972..3235745 (+) 774 WP_221902668.1 alpha/beta hydrolase -
  MCU78_RS13750 (MCU78_13750) rcrQ 3235922..3237817 (-) 1896 WP_185941673.1 ABC transporter ATP-binding protein Regulator
  MCU78_RS13755 (MCU78_13755) rcrP 3238063..3239796 (-) 1734 WP_185941580.1 ABC transporter ATP-binding protein Regulator
  MCU78_RS13760 (MCU78_13760) - 3240031..3240342 (+) 312 WP_185941581.1 MoaD/ThiS family protein -
  MCU78_RS13765 (MCU78_13765) - 3240364..3241863 (+) 1500 WP_185941582.1 hypothetical protein -
  MCU78_RS13770 (MCU78_13770) - 3242037..3242741 (+) 705 WP_185941583.1 DUF2993 domain-containing protein -
  MCU78_RS13775 (MCU78_13775) - 3243105..3243947 (+) 843 WP_185941584.1 sulfurtransferase -
  MCU78_RS13780 (MCU78_13780) - 3243993..3244280 (+) 288 WP_185941585.1 DUF1416 domain-containing protein -
  MCU78_RS13785 (MCU78_13785) - 3244437..3244715 (+) 279 WP_185941586.1 DUF3099 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62691.00 Da        Isoelectric Point: 6.4146

>NTDB_id=564644 MCU78_RS13755 WP_185941580.1 3238063..3239796(-) (rcrP) [Streptomyces sp. TYQ1024]
MLVRLLRARMKRYSRPLALVVLLQLVQTLATLYLPTLNADIIDKGVVKGDTGYILTTGGVMAAVALVQLVCSLGAVYVGA
RIAMGVGRDLREEVFDRVQSFSSREVGRFGAPSLITRTTNDVQQVQMLVLMSFTLMVGAPIMCFGGIVMALKQDVPLSGL
LLAIVPVLGVVISLTVRRLRPMFKDVQERVDTVNRILREQIAGIRVIRAFVRDKHERERFHAANTALMDVSMRSGRLAAV
MFPAVMLIVNAASVAVLWFGGHRIDSGDMEIGALTAFLSYLMQILMAVMMATFMFMMVPRAEVCAERIHEVLDTDTSVVP
AAAPVTELRGHGHLELRGAGFRYPGAEEPVLRNVSLVARPGEVTAVIGSTGSGKSTLLGLVPRLFDATEGEVLIGGVDVR
EADPALIARTVGLVPQKPYLFTGTIASNLRYGRPDATDEELWAALETAQAREFVEAMEEGLEAPIAQGGSNVSGGQRQRL
AIARTLVRRPEIYLFDDSFSALDYATDARLRAALSRETGDATVLVVAQRVSTIRDADRIVVLDEGRVVGTGTHTELMASN
ETYREIVLSQLTEEEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=564644 MCU78_RS13755 WP_185941580.1 3238063..3239796(-) (rcrP) [Streptomyces sp. TYQ1024]
GTGCTGGTACGCCTACTCCGAGCCCGAATGAAGCGCTACTCCCGCCCCTTGGCGCTGGTGGTGCTCCTTCAGCTCGTCCA
AACCCTCGCGACGCTCTATCTGCCGACGCTCAACGCCGACATCATCGACAAGGGCGTGGTGAAGGGCGATACCGGCTACA
TCCTCACCACCGGCGGGGTAATGGCGGCGGTGGCCCTCGTCCAGCTCGTGTGCTCGCTCGGCGCGGTCTACGTCGGCGCG
CGCATCGCCATGGGCGTCGGCCGGGACCTGCGCGAGGAGGTCTTCGACCGGGTGCAGTCCTTCTCGTCCCGCGAGGTGGG
CAGATTCGGGGCGCCCTCTCTGATCACACGGACCACCAATGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGTCGTTCA
CGCTGATGGTGGGCGCGCCCATCATGTGCTTCGGCGGCATCGTGATGGCCCTCAAGCAGGACGTGCCGCTGTCCGGCCTG
CTGCTGGCCATCGTGCCCGTGCTCGGCGTCGTCATCTCGCTGACCGTCCGGCGGCTGCGACCGATGTTCAAGGACGTGCA
GGAGCGGGTCGACACCGTCAACCGCATCCTCCGCGAGCAGATCGCCGGCATCCGCGTCATCCGCGCGTTCGTCCGGGACA
AGCACGAGCGCGAGCGCTTCCACGCGGCCAACACCGCGCTGATGGACGTCTCGATGCGCTCCGGCCGGCTGGCGGCCGTC
ATGTTCCCGGCCGTGATGCTGATCGTGAACGCGGCCTCGGTCGCGGTGCTGTGGTTCGGCGGGCACCGCATCGACAGCGG
CGACATGGAGATCGGCGCCCTCACCGCGTTCCTCAGCTACCTGATGCAGATCCTGATGGCGGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTCTGCGCCGAGCGGATCCACGAGGTCCTCGACACCGACACCAGCGTGGTGCCG
GCCGCCGCGCCGGTCACCGAGCTGCGCGGGCACGGCCACCTCGAACTGCGCGGCGCCGGCTTCCGCTACCCCGGCGCCGA
GGAACCCGTCCTCCGGAACGTCTCCCTGGTCGCGCGCCCCGGCGAGGTCACCGCCGTCATCGGCTCCACCGGCAGCGGCA
AGTCCACGCTGCTCGGGCTGGTCCCCCGGCTCTTCGACGCCACCGAGGGCGAGGTCCTGATCGGCGGCGTGGACGTGCGC
GAGGCCGACCCCGCCCTCATCGCCCGCACGGTGGGACTCGTCCCGCAGAAGCCCTACCTCTTCACCGGCACCATCGCCTC
CAACCTCCGCTACGGGCGGCCCGACGCGACGGACGAGGAGCTGTGGGCGGCACTGGAGACCGCCCAGGCCCGGGAGTTCG
TCGAGGCCATGGAGGAGGGGCTGGAGGCCCCCATCGCCCAGGGCGGCTCCAACGTCTCCGGCGGCCAGCGCCAGCGCCTG
GCCATCGCCCGCACCCTGGTGCGCCGACCCGAGATCTACCTGTTCGACGACTCCTTCTCCGCGCTCGACTACGCCACCGA
CGCCCGGCTGCGGGCGGCGCTGTCCCGGGAGACCGGGGATGCCACCGTCCTCGTCGTGGCCCAGCGCGTCTCCACCATCC
GCGACGCCGACCGGATCGTCGTCCTGGACGAGGGCCGCGTCGTCGGCACCGGAACCCACACCGAGCTGATGGCCTCCAAC
GAGACCTACCGGGAGATCGTGCTGTCCCAGCTCACCGAGGAGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

37.655

97.574

0.367