Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MCU78_RS13750 Genome accession   NZ_CP092051
Coordinates   3235922..3237817 (-) Length   631 a.a.
NCBI ID   WP_185941673.1    Uniprot ID   -
Organism   Streptomyces sp. TYQ1024     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3230922..3242817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MCU78_RS13730 (MCU78_13730) - 3231276..3232547 (+) 1272 WP_238513492.1 damage-control phosphatase ARMT1 family protein -
  MCU78_RS13735 (MCU78_13735) - 3232766..3233794 (-) 1029 WP_004943907.1 LacI family DNA-binding transcriptional regulator -
  MCU78_RS13740 (MCU78_13740) - 3233819..3234622 (-) 804 WP_185941579.1 response regulator transcription factor -
  MCU78_RS13745 (MCU78_13745) - 3234972..3235745 (+) 774 WP_221902668.1 alpha/beta hydrolase -
  MCU78_RS13750 (MCU78_13750) rcrQ 3235922..3237817 (-) 1896 WP_185941673.1 ABC transporter ATP-binding protein Regulator
  MCU78_RS13755 (MCU78_13755) rcrP 3238063..3239796 (-) 1734 WP_185941580.1 ABC transporter ATP-binding protein Regulator
  MCU78_RS13760 (MCU78_13760) - 3240031..3240342 (+) 312 WP_185941581.1 MoaD/ThiS family protein -
  MCU78_RS13765 (MCU78_13765) - 3240364..3241863 (+) 1500 WP_185941582.1 hypothetical protein -
  MCU78_RS13770 (MCU78_13770) - 3242037..3242741 (+) 705 WP_185941583.1 DUF2993 domain-containing protein -

Sequence

Protein


Download         Length: 631 a.a.        Molecular weight: 68425.21 Da        Isoelectric Point: 5.1040

>NTDB_id=564643 MCU78_RS13750 WP_185941673.1 3235922..3237817(-) (rcrQ) [Streptomyces sp. TYQ1024]
MGGQPTEKSADFKGSGRRLFARMGPEKHMLWAVLLLAVASVAMSVAGPKVLGHATDLIFAGVVGQQMQGGTTKAQALEGL
RHSGHGNIADVLSGVDFTPGQGIDFGAVGTVLLWVLLIYVAASFFGFLQARVVTAAIQRTVFRLRQDVEEKLARLPLSYF
DKHQRGEILSRATNDIDNIAQTFQQTLSQMMASVLTMVGVLAVMFWISWLLAVVALITVPVSVYVATAVGKRAQPQFVSQ
WASTGRLSAHVEEMYTAHSLVKVFGRQEESAAVFRKENEELYRASFKAQFISGVIQPAMMFIGNLNYVLVAVVGGLRVAS
GSLSIGDVQAFVQYSRQFSQPLMQVASMANLVQSGVASAERVFELLDAEEQSPDDDERKLGRVRGEVTFENVSFRYDADK
PLIEDLSLTVRPGQTVAIVGPTGAGKTTLVNLLMRFYEVNGGRITLDGTDVATLSREELRSHIGMVLQDTWLFGGTIADN
IAYGADGASTERIVEAAKATHVDRFVRTLPDGYDTVIDEEGGNVSVGEKQLITIARAFLAEPEILILDEATSSVDTRTEV
LIQQAMAELRSGRTSFVIAHRLSTIRDADLILVMESGRIVEQGDHESLLAADGAYARLYAAQFAQPVAEEA

Nucleotide


Download         Length: 1896 bp        

>NTDB_id=564643 MCU78_RS13750 WP_185941673.1 3235922..3237817(-) (rcrQ) [Streptomyces sp. TYQ1024]
ATGGGCGGCCAGCCGACCGAGAAGTCCGCCGACTTCAAGGGCTCCGGCCGGCGCCTGTTCGCCCGCATGGGTCCCGAGAA
GCACATGCTGTGGGCCGTGCTGCTGCTCGCGGTGGCCAGCGTCGCCATGTCGGTGGCCGGCCCCAAGGTCCTCGGCCACG
CCACCGACCTCATCTTCGCCGGTGTCGTCGGACAGCAGATGCAGGGGGGCACTACCAAGGCCCAGGCCCTTGAGGGGCTG
CGCCACAGCGGTCACGGCAACATCGCGGACGTCCTGTCCGGCGTCGACTTCACACCCGGCCAGGGCATCGACTTCGGCGC
CGTCGGCACGGTGCTGCTGTGGGTGCTGCTGATCTACGTCGCCGCGTCCTTCTTCGGGTTCCTCCAGGCGCGGGTCGTCA
CCGCCGCCATCCAGCGCACCGTCTTCCGGCTGCGCCAGGACGTCGAGGAGAAGCTGGCGCGGCTGCCGCTGAGCTACTTC
GACAAGCACCAACGCGGCGAGATCCTGTCCCGCGCCACCAACGACATCGACAACATCGCCCAGACCTTCCAGCAGACCCT
GAGCCAGATGATGGCCTCGGTACTGACCATGGTCGGCGTGCTCGCCGTGATGTTCTGGATCTCCTGGCTGCTGGCCGTCG
TCGCGCTGATCACCGTTCCCGTCTCGGTGTACGTCGCCACGGCCGTCGGCAAGCGCGCACAGCCGCAGTTCGTGTCCCAG
TGGGCGTCGACCGGCCGGCTCAGCGCCCACGTCGAGGAGATGTACACGGCCCACTCGCTGGTGAAGGTCTTCGGCCGGCA
GGAGGAGTCCGCCGCGGTCTTCCGCAAGGAGAACGAGGAGCTCTACCGGGCCAGCTTCAAGGCGCAGTTCATATCCGGCG
TCATCCAGCCCGCGATGATGTTCATCGGCAACCTCAACTACGTGCTCGTCGCCGTCGTCGGCGGACTGCGGGTGGCGAGC
GGCTCGCTGTCGATCGGCGACGTCCAGGCGTTCGTCCAGTACTCGCGCCAGTTCAGCCAGCCGCTGATGCAGGTCGCCTC
CATGGCCAACCTCGTCCAGTCCGGCGTCGCCTCCGCCGAGCGCGTCTTCGAGCTCCTCGACGCCGAGGAGCAGTCCCCGG
ACGACGACGAGCGGAAGCTCGGCCGGGTCCGCGGCGAGGTCACGTTCGAGAACGTCTCCTTCCGCTACGACGCCGACAAG
CCGCTCATCGAGGACCTCTCCCTCACCGTCCGGCCCGGCCAGACCGTCGCCATCGTCGGCCCCACGGGCGCCGGGAAGAC
CACCCTGGTCAACCTGCTGATGCGGTTCTACGAGGTGAACGGCGGCCGGATCACCCTCGACGGCACCGACGTCGCGACCC
TCTCCCGTGAGGAGCTGCGCTCCCACATCGGCATGGTCCTTCAGGACACCTGGCTGTTCGGCGGCACCATCGCGGACAAC
ATCGCCTACGGCGCCGACGGCGCCTCGACCGAGCGGATCGTCGAGGCGGCCAAGGCCACCCACGTCGACCGCTTCGTCCG
GACGCTGCCCGACGGCTACGACACGGTGATCGACGAGGAGGGCGGCAACGTCAGCGTCGGCGAGAAGCAACTGATCACCA
TCGCGCGGGCGTTCCTCGCCGAGCCCGAGATCCTCATCCTGGACGAGGCCACCAGCTCGGTGGACACCCGCACCGAGGTG
CTCATCCAGCAGGCCATGGCCGAACTGCGCTCCGGCCGCACCAGCTTCGTGATCGCCCACCGGCTGTCCACGATCCGGGA
CGCGGACCTGATCCTCGTGATGGAGTCCGGGCGGATCGTGGAACAGGGCGATCATGAGTCGCTGCTGGCGGCGGACGGCG
CGTACGCGCGGCTGTACGCGGCACAGTTCGCGCAGCCGGTGGCGGAGGAGGCGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(31-342)

ABC transporter (ABC_tran)

(404-552)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.005

97.781

0.401