Detailed information NTG0564628

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MCU78_RS08780
• Genome accession: NZ_CP092051
• Coordinates: 2132431..2133669 (-)
• Length: 412 a.a.
• NCBI ID: WP_185941294.1
• Uniprot ID: -
• Organism: Streptomyces sp. TYQ1024
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2127431..2138669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCU78_RS08760 (MCU78_08760)	-	2127441..2127779 (-)	339	WP_185941298.1	P-II family nitrogen regulator	-
MCU78_RS08765 (MCU78_08765)	-	2127776..2129119 (-)	1344	WP_185941297.1	ammonium transporter	-
MCU78_RS08770 (MCU78_08770)	-	2129525..2131087 (-)	1563	WP_185941296.1	hypothetical protein	-
MCU78_RS08775 (MCU78_08775)	-	2131580..2132251 (+)	672	WP_185941295.1	bifunctional DNA primase/polymerase	-
MCU78_RS08780 (MCU78_08780)	pilA	2132431..2133669 (-)	1239	WP_185941294.1	signal recognition particle-docking protein FtsY	Machinery gene
MCU78_RS08785 (MCU78_08785)	-	2133922..2135412 (+)	1491	WP_185941346.1	cytosine permease	-
MCU78_RS08790 (MCU78_08790)	-	2135487..2135975 (-)	489	WP_185941293.1	hypothetical protein	-
MCU78_RS08795 (MCU78_08795)	-	2136424..2137668 (-)	1245	WP_185941292.1	helix-turn-helix domain-containing protein	-
MCU78_RS08800 (MCU78_08800)	-	2137792..2138454 (-)	663	WP_185941291.1	HAD family hydrolase	-

Sequence

Protein

• Length: 412 a.a.
• Molecular weight: 43315.40 Da
• Isoelectric Point: 4.5127

>NTDB_id=564628 MCU78_RS08780 WP_185941294.1 2132431..2133669(-) (pilA) [Streptomyces sp. TYQ1024]
MEIVILAVVIAVVVLGAISGLVVSSRKKKQLPPAPPPSSPSVTAPPAEPHVGEEAETPREEKRRTVEEVELPPAPEEEAA
PPEAIEEPAPEPEAPAVEVPEPTAGRLVRLRARLSRSQNSLGKGLLTLLSREHLDEDTWEEIEDTLLTADVGVAPTQELV
ERLRERVRVLGTRTPEELRGLLREELLTLIGTDADRAVHTEPGVGVNGEEKPGVVMVVGVNGTGKTTTTGKLARVLVADG
KSVVLGAADTFRAAAADQLQTWGERVGARTVRGPEGGDPASVAFDAVKEGIAKSADVVLIDTAGRLHTKTGLMDELGKVK
RVVEKHGSVDEVLLVLDATTGQNGLVQARVFAEVVNITGIVLTKLDGTAKGGIVVAVQRELGVPVKLVGLGEGADDLAPF
EPEAFVDALIGD

Nucleotide

• Length: 1239 bp

>NTDB_id=564628 MCU78_RS08780 WP_185941294.1 2132431..2133669(-) (pilA) [Streptomyces sp. TYQ1024]
ATGGAAATCGTCATCCTTGCTGTAGTCATCGCTGTGGTCGTGCTCGGCGCGATCAGCGGGCTCGTGGTCAGCAGCCGCAA
GAAGAAGCAGCTGCCCCCGGCTCCGCCGCCGAGCAGCCCGTCCGTCACCGCGCCGCCCGCCGAGCCCCACGTCGGCGAGG
AGGCCGAGACCCCGCGCGAAGAGAAGCGCCGCACCGTCGAGGAGGTCGAGCTCCCGCCGGCCCCGGAAGAGGAGGCGGCC
CCCCCGGAGGCCATCGAGGAGCCGGCGCCCGAGCCCGAGGCGCCCGCCGTCGAGGTGCCCGAGCCCACCGCCGGCCGGCT
CGTCCGGCTCCGCGCCCGTCTCTCGCGCTCGCAGAACTCCCTGGGCAAGGGGCTGCTCACGCTGCTCTCCCGGGAACACC
TCGACGAGGACACCTGGGAGGAGATCGAGGACACCCTGCTCACCGCCGACGTCGGCGTCGCGCCGACGCAGGAGCTGGTC
GAGCGGCTGCGCGAGCGCGTCAGGGTGCTCGGCACCCGCACCCCGGAAGAGCTGCGCGGCCTGCTCCGCGAGGAGCTCCT
GACCCTCATCGGTACCGACGCCGACCGTGCCGTGCACACCGAGCCCGGCGTGGGCGTCAACGGTGAGGAGAAGCCCGGCG
TCGTCATGGTCGTCGGCGTCAACGGCACCGGCAAGACCACCACCACCGGCAAGCTCGCCCGCGTCCTCGTGGCCGACGGC
AAGTCCGTCGTCCTCGGCGCGGCCGACACCTTCCGCGCCGCCGCCGCCGACCAGCTCCAGACCTGGGGCGAGCGCGTCGG
CGCCCGTACCGTCCGCGGGCCCGAGGGCGGCGACCCCGCCTCGGTCGCGTTCGACGCGGTCAAGGAGGGCATCGCGAAGA
GCGCGGACGTCGTCCTCATCGACACCGCCGGCCGCCTGCACACCAAGACCGGGCTCATGGACGAGCTCGGCAAGGTCAAG
CGCGTCGTCGAGAAGCACGGCTCGGTCGACGAGGTGCTGCTCGTCCTGGACGCCACCACCGGGCAGAACGGCCTGGTCCA
GGCCCGGGTGTTCGCGGAGGTCGTCAACATCACCGGCATCGTGCTCACCAAGCTCGACGGTACGGCCAAGGGCGGCATCG
TCGTGGCCGTCCAGCGCGAGCTGGGCGTGCCGGTGAAGCTGGTCGGCCTGGGCGAGGGCGCGGACGACCTCGCGCCGTTC
GAGCCCGAGGCGTTCGTCGACGCCCTGATCGGCGACTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (121-186)

• SRP54-type protein, GTPase domain (SRP54) (213-410)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	40.431	100	0.41