Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MCU78_RS07995 Genome accession   NZ_CP092051
Coordinates   1938917..1939702 (+) Length   261 a.a.
NCBI ID   WP_185943332.1    Uniprot ID   -
Organism   Streptomyces sp. TYQ1024     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1933917..1944702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MCU78_RS07985 (MCU78_07985) - 1934360..1937230 (-) 2871 WP_185943330.1 vitamin B12-dependent ribonucleotide reductase -
  MCU78_RS07990 (MCU78_07990) nrdR 1937349..1937903 (-) 555 WP_185943331.1 transcriptional regulator NrdR -
  MCU78_RS07995 (MCU78_07995) dinR/lexA 1938917..1939702 (+) 786 WP_185943332.1 transcriptional repressor LexA Regulator
  MCU78_RS08000 (MCU78_08000) - 1939886..1941898 (-) 2013 WP_185943333.1 ATP-dependent DNA helicase -
  MCU78_RS08005 (MCU78_08005) - 1941996..1943999 (-) 2004 WP_185943334.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28402.05 Da        Isoelectric Point: 8.0906

>NTDB_id=564623 MCU78_RS07995 WP_185943332.1 1938917..1939702(+) (dinR/lexA) [Streptomyces sp. TYQ1024]
MTTTANSATITAQDRSQNRLDQTHPMNDTGMNNDGQKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPHNSAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=564623 MCU78_RS07995 WP_185943332.1 1938917..1939702(+) (dinR/lexA) [Streptomyces sp. TYQ1024]
GTGACCACCACCGCAAACAGCGCCACCATCACCGCCCAGGACCGCTCCCAGAACCGACTCGACCAGACACATCCGATGAA
CGACACCGGCATGAACAACGACGGGCAGAAGCCGGCCCGTTCGCTCCCCGGGCGGCCACCCGGAATCCGCGCGGACAGCT
CCGGCCTCACGGACCGGCAGCGGCGCGTCATCGAGGTCATCCGGGACTCGGTGCAGCGGCGCGGCTACCCACCGTCCATG
CGTGAGATCGGCCAGGCGGTGGGGCTGTCCAGCACCTCCTCGGTCGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTT
CCTGCGCAGGGATCCGCACCGCCCCCGCGCCTACGAGGTGCGCGGCTCCGACCAGCCCAGCTCCCAGCCGACGGACACCA
CCGGCAAACCCGCCGCGTCCTACGTGCCGCTGGTCGGCCGGATCGCAGCGGGCGGGCCGATCCTCGCGGAGGAGTCGGTC
GAGGACGTCTTCCCCCTCCCCCGGCAGCTGGTGGGCGACGGCGAGCTGTTCGTCCTCAAGGTGGTCGGCGACTCGATGAT
CGAGGCCGCGATCTGTGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGTGACATCGTGGCCGCGA
TGCTCGACGGGGAGGCGACGGTCAAGCGCTTCCGGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACTCCGCCTAC
CAGCCCATCCCCGGTGACGAGGCCACGATCCTGGGCAAGGTCGTGGCCGTCCTGCGGCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(54-117)

Peptidase S24-like (Peptidase_S24)

(143-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

81.226

0.379