Detailed information NTG0564600

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MCS24_RS06610
• Genome accession: NZ_CP092050
• Coordinates: 1544202..1545326 (+)
• Length: 374 a.a.
• NCBI ID: WP_005874168.1
• Uniprot ID: Q7MXB1
• Organism: Porphyromonas gingivalis strain W50/BR1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1539202..1550326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCS24_RS06600 (MCS24_06605)	-	1540005..1540394 (-)	390	WP_043876394.1	hypothetical protein	-
MCS24_RS06605 (MCS24_06610)	purL	1540505..1544209 (+)	3705	WP_005874200.1	phosphoribosylformylglycinamidine synthase	-
MCS24_RS06610 (MCS24_06615)	dprA	1544202..1545326 (+)	1125	WP_005874168.1	DNA-processing protein DprA	Machinery gene
MCS24_RS06615 (MCS24_06620)	-	1545341..1546231 (+)	891	WP_005874157.1	glycosyltransferase family 2 protein	-
MCS24_RS10420	-	1546304..1546405 (-)	102	WP_353310112.1	DUF1661 domain-containing protein	-
MCS24_RS06620 (MCS24_06625)	-	1546374..1546571 (+)	198	WP_165385045.1	DUF1661 domain-containing protein	-
MCS24_RS06625 (MCS24_06630)	-	1546831..1547409 (+)	579	WP_005874170.1	glycoside hydrolase family 108 protein	-
MCS24_RS06630 (MCS24_06635)	-	1547547..1548140 (-)	594	WP_005874184.1	chromate transporter	-
MCS24_RS06635 (MCS24_06640)	-	1548159..1548716 (-)	558	WP_005874188.1	chromate transporter	-
MCS24_RS06640 (MCS24_06645)	gldN	1548910..1549989 (-)	1080	WP_005874243.1	gliding motility protein GldN	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40499.37 Da
• Isoelectric Point: 5.7965

>NTDB_id=564600 MCS24_RS06610 WP_005874168.1 1544202..1545326(+) (dprA) [Porphyromonas gingivalis strain W50/BR1]
MDDRRPQLTEEQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSVMEEARRKLDQ
ALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTRNITAYGRTATERIVSGLAETIPDLLIVSGL
AYGVDVAAHKAALDNGLPTVAVLAHGLDRIYPSGHRSIAMEMLRNGGLLTDYPMGTEPERFNFVGRNRIVAGLSDATLVI
ESAEKGGSLITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKPQTLNFRPDSWP
DTPVAECLLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQSQPGGIYSVI

Nucleotide

• Length: 1125 bp

>NTDB_id=564600 MCS24_RS06610 WP_005874168.1 1544202..1545326(+) (dprA) [Porphyromonas gingivalis strain W50/BR1]
ATGGATGATCGTCGCCCCCAACTGACAGAGGAGCAACTGCTTTTCCGCATCGCACTCACGCATGTAAAAGGCGTGGGTAG
CGTGCTGGCAAGGCAGCTGCTTTCGGCTATGGGCAGTCCCGAAGCCATCTTTTCCGACAGGAAGGAGCTGGTACAGAGGC
TACCGAAAGCACCTCGCCGCCTGCTCGATGCCATCTTCTCTCCTTCGGTCATGGAGGAAGCACGCCGAAAGTTGGATCAA
GCCCTCAAAGCCGGTCTGAATATGTATTTCATCACCGATGATAACTATCCTTACCGCTTGAAAGAATGTGTCGACGCCCC
CATCCTTCTTTATTCCAAAGGCAATGTCGATCTCTCGCCACGTAGGGTGCTGAGCATTGTAGGTACGCGCAATATCACGG
CCTACGGACGTACAGCCACGGAGCGAATCGTATCGGGATTGGCTGAAACCATCCCCGATTTGCTTATCGTCAGCGGACTG
GCGTACGGCGTCGATGTCGCAGCTCATAAGGCCGCTTTGGACAATGGCTTGCCCACTGTAGCTGTATTGGCCCATGGATT
GGACAGGATTTATCCGAGCGGTCATCGTTCCATTGCTATGGAGATGCTCCGAAACGGAGGCTTGCTCACGGATTACCCTA
TGGGGACTGAACCGGAGCGATTCAATTTCGTCGGTCGCAATCGCATCGTAGCAGGCTTGTCGGACGCCACACTTGTGATC
GAATCGGCCGAAAAAGGAGGCTCCCTCATCACTGCCGGACTGGCATTCGGCTACAATCGCGAAGTACTGGCTCTACCCGG
ACGAGCCACGGATAGCCGTTCGGCCGGCTGCAATGCCTTGATAAGGGATCAAAAAGCCGCGCTTGTCAGCTCGGCTCAAG
ATGTGCTGACGCTGCTCGATTGGAGTTCTACCATAGACGCCAAACCTCAGACATTGAATTTCCGTCCCGATAGTTGGCCG
GATACCCCCGTAGCCGAATGTCTTCTCAGAGCAGGCACAGCCTCGGTGGACGAGCTGACACGCGCTACCGGACTACCTAT
AAACGATGTTTCTGCTCAGCTTTTCGACCTCGAATTGGACGGACTGGTACAGTCTCAGCCCGGTGGCATATACTCCGTTA
TATAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (328-369)

• DNA recombination-mediator protein A (DNA_processg_A) (83-289)

3D structure

• AlphaFold DB: Q7MXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	37.027	98.93	0.366