Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KHA81_RS19510 Genome accession   NZ_CP074391
Coordinates   393542..393706 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain L-17     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 388542..398706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHA81_RS19505 srfAB 390487..393477 (+) 2991 Protein_369 surfactin non-ribosomal peptide synthetase SrfAB -
  KHA81_RS19510 comS 393542..393706 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=564593 KHA81_RS19510 WP_269465305.1 393542..393706(+) (comS) [Bacillus amyloliquefaciens strain L-17]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=564593 KHA81_RS19510 WP_269465305.1 393542..393706(+) (comS) [Bacillus amyloliquefaciens strain L-17]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5