Detailed information NTG0564556

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MCS27_RS01400
• Genome accession: NZ_CP092049
• Coordinates: 330267..331391 (-)
• Length: 374 a.a.
• NCBI ID: WP_005874168.1
• Uniprot ID: Q7MXB1
• Organism: Porphyromonas gingivalis strain W50/BE1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325267..336391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCS27_RS01370 (MCS27_01370)	gldN	325604..326683 (+)	1080	WP_005874243.1	gliding motility protein GldN	-
MCS27_RS01375 (MCS27_01375)	-	326877..327434 (+)	558	WP_005874188.1	chromate transporter	-
MCS27_RS01380 (MCS27_01380)	-	327453..328046 (+)	594	WP_005874184.1	chromate transporter	-
MCS27_RS01385 (MCS27_01385)	-	328184..328762 (-)	579	WP_005874170.1	glycoside hydrolase family 108 protein	-
MCS27_RS01390 (MCS27_01390)	-	329022..329219 (-)	198	WP_165385045.1	DUF1661 domain-containing protein	-
MCS27_RS10355	-	329188..329289 (+)	102	WP_353310112.1	DUF1661 domain-containing protein	-
MCS27_RS01395 (MCS27_01395)	-	329362..330252 (-)	891	WP_005874157.1	glycosyltransferase family 2 protein	-
MCS27_RS01400 (MCS27_01400)	dprA	330267..331391 (-)	1125	WP_005874168.1	DNA-processing protein DprA	Machinery gene
MCS27_RS01405 (MCS27_01405)	purL	331384..335088 (-)	3705	WP_005874200.1	phosphoribosylformylglycinamidine synthase	-
MCS27_RS10360	-	335332..335469 (+)	138	Protein_277	IS4 family transposase	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40499.37 Da
• Isoelectric Point: 5.7965

>NTDB_id=564556 MCS27_RS01400 WP_005874168.1 330267..331391(-) (dprA) [Porphyromonas gingivalis strain W50/BE1]
MDDRRPQLTEEQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSVMEEARRKLDQ
ALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTRNITAYGRTATERIVSGLAETIPDLLIVSGL
AYGVDVAAHKAALDNGLPTVAVLAHGLDRIYPSGHRSIAMEMLRNGGLLTDYPMGTEPERFNFVGRNRIVAGLSDATLVI
ESAEKGGSLITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKPQTLNFRPDSWP
DTPVAECLLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQSQPGGIYSVI

Nucleotide

• Length: 1125 bp

>NTDB_id=564556 MCS27_RS01400 WP_005874168.1 330267..331391(-) (dprA) [Porphyromonas gingivalis strain W50/BE1]
ATGGATGATCGTCGCCCCCAACTGACAGAGGAGCAACTGCTTTTCCGCATCGCACTCACGCATGTAAAAGGCGTGGGTAG
CGTGCTGGCAAGGCAGCTGCTTTCGGCTATGGGCAGTCCCGAAGCCATCTTTTCCGACAGGAAGGAGCTGGTACAGAGGC
TACCGAAAGCACCTCGCCGCCTGCTCGATGCCATCTTCTCTCCTTCGGTCATGGAGGAAGCACGCCGAAAGTTGGATCAA
GCCCTCAAAGCCGGTCTGAATATGTATTTCATCACCGATGATAACTATCCTTACCGCTTGAAAGAATGTGTCGACGCCCC
CATCCTTCTTTATTCCAAAGGCAATGTCGATCTCTCGCCACGTAGGGTGCTGAGCATTGTAGGTACGCGCAATATCACGG
CCTACGGACGTACAGCCACGGAGCGAATCGTATCGGGATTGGCTGAAACCATCCCCGATTTGCTTATCGTCAGCGGACTG
GCGTACGGCGTCGATGTCGCAGCTCATAAGGCCGCTTTGGACAATGGCTTGCCCACTGTAGCTGTATTGGCCCATGGATT
GGACAGGATTTATCCGAGCGGTCATCGTTCCATTGCTATGGAGATGCTCCGAAACGGAGGCTTGCTCACGGATTACCCTA
TGGGGACTGAACCGGAGCGATTCAATTTCGTCGGTCGCAATCGCATCGTAGCAGGCTTGTCGGACGCCACACTTGTGATC
GAATCGGCCGAAAAAGGAGGCTCCCTCATCACTGCCGGACTGGCATTCGGCTACAATCGCGAAGTACTGGCTCTACCCGG
ACGAGCCACGGATAGCCGTTCGGCCGGCTGCAATGCCTTGATAAGGGATCAAAAAGCCGCGCTTGTCAGCTCGGCTCAAG
ATGTGCTGACGCTGCTCGATTGGAGTTCTACCATAGACGCCAAACCTCAGACATTGAATTTCCGTCCCGATAGTTGGCCG
GATACCCCCGTAGCCGAATGTCTTCTCAGAGCAGGCACAGCCTCGGTGGACGAGCTGACACGCGCTACCGGACTACCTAT
AAACGATGTTTCTGCTCAGCTTTTCGACCTCGAATTGGACGGACTGGTACAGTCTCAGCCCGGTGGCATATACTCCGTTA
TATAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (328-369)

• DNA recombination-mediator protein A (DNA_processg_A) (83-289)

3D structure

• AlphaFold DB: Q7MXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	37.027	98.93	0.366