Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KHA81_RS07490 Genome accession   NZ_CP074391
Coordinates   1431716..1432180 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain L-17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1426716..1437180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHA81_RS07470 - 1427196..1429016 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  KHA81_RS07475 - 1429042..1430211 (-) 1170 WP_007611083.1 aminotransferase A -
  KHA81_RS07480 - 1430412..1430573 (-) 162 WP_007409608.1 hypothetical protein -
  KHA81_RS07485 cheV 1430762..1431673 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  KHA81_RS07490 kre 1431716..1432180 (-) 465 WP_003154622.1 YkyB family protein Regulator
  KHA81_RS07495 - 1432303..1433595 (-) 1293 WP_014304918.1 MFS transporter -
  KHA81_RS07500 - 1433671..1434165 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  KHA81_RS07505 - 1434240..1435103 (-) 864 WP_015388306.1 metallophosphoesterase -
  KHA81_RS07510 fadH 1435247..1436011 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  KHA81_RS19595 - 1436122..1436667 (+) 546 Protein_1437 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=564547 KHA81_RS07490 WP_003154622.1 1431716..1432180(-) (kre) [Bacillus amyloliquefaciens strain L-17]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=564547 KHA81_RS07490 WP_003154622.1 1431716..1432180(-) (kre) [Bacillus amyloliquefaciens strain L-17]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929