Detailed information NTG0564524

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MCS25_RS01395
• Genome accession: NZ_CP092048
• Coordinates: 330265..331389 (-)
• Length: 374 a.a.
• NCBI ID: WP_005874168.1
• Uniprot ID: Q7MXB1
• Organism: Porphyromonas gingivalis strain W50
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325265..336389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MCS25_RS01365 (MCS25_01365)	gldN	325602..326681 (+)	1080	WP_005874243.1	gliding motility protein GldN	-
MCS25_RS01370 (MCS25_01370)	-	326875..327432 (+)	558	WP_005874188.1	chromate transporter	-
MCS25_RS01375 (MCS25_01375)	-	327451..328044 (+)	594	WP_005874184.1	chromate transporter	-
MCS25_RS01380 (MCS25_01380)	-	328182..328760 (-)	579	WP_005874170.1	glycoside hydrolase family 108 protein	-
MCS25_RS01385 (MCS25_01385)	-	329020..329217 (-)	198	WP_165385045.1	DUF1661 domain-containing protein	-
MCS25_RS10315	-	329186..329287 (+)	102	WP_353310112.1	DUF1661 domain-containing protein	-
MCS25_RS01390 (MCS25_01390)	-	329360..330250 (-)	891	WP_005874157.1	glycosyltransferase family 2 protein	-
MCS25_RS01395 (MCS25_01395)	dprA	330265..331389 (-)	1125	WP_005874168.1	DNA-processing protein DprA	Machinery gene
MCS25_RS01400 (MCS25_01400)	purL	331382..335086 (-)	3705	WP_005874200.1	phosphoribosylformylglycinamidine synthase	-
MCS25_RS01405 (MCS25_01405)	-	335197..335586 (+)	390	WP_043876394.1	hypothetical protein	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40499.37 Da
• Isoelectric Point: 5.7965

>NTDB_id=564524 MCS25_RS01395 WP_005874168.1 330265..331389(-) (dprA) [Porphyromonas gingivalis strain W50]
MDDRRPQLTEEQLLFRIALTHVKGVGSVLARQLLSAMGSPEAIFSDRKELVQRLPKAPRRLLDAIFSPSVMEEARRKLDQ
ALKAGLNMYFITDDNYPYRLKECVDAPILLYSKGNVDLSPRRVLSIVGTRNITAYGRTATERIVSGLAETIPDLLIVSGL
AYGVDVAAHKAALDNGLPTVAVLAHGLDRIYPSGHRSIAMEMLRNGGLLTDYPMGTEPERFNFVGRNRIVAGLSDATLVI
ESAEKGGSLITAGLAFGYNREVLALPGRATDSRSAGCNALIRDQKAALVSSAQDVLTLLDWSSTIDAKPQTLNFRPDSWP
DTPVAECLLRAGTASVDELTRATGLPINDVSAQLFDLELDGLVQSQPGGIYSVI

Nucleotide

• Length: 1125 bp

>NTDB_id=564524 MCS25_RS01395 WP_005874168.1 330265..331389(-) (dprA) [Porphyromonas gingivalis strain W50]
ATGGATGATCGTCGCCCCCAACTGACAGAGGAGCAACTGCTTTTCCGCATCGCACTCACGCATGTAAAAGGCGTGGGTAG
CGTGCTGGCAAGGCAGCTGCTTTCGGCTATGGGCAGTCCCGAAGCCATCTTTTCCGACAGGAAGGAGCTGGTACAGAGGC
TACCGAAAGCACCTCGCCGCCTGCTCGATGCCATCTTCTCTCCTTCGGTCATGGAGGAAGCACGCCGAAAGTTGGATCAA
GCCCTCAAAGCCGGTCTGAATATGTATTTCATCACCGATGATAACTATCCTTACCGCTTGAAAGAATGTGTCGACGCCCC
CATCCTTCTTTATTCCAAAGGCAATGTCGATCTCTCGCCACGTAGGGTGCTGAGCATTGTAGGTACGCGCAATATCACGG
CCTACGGACGTACAGCCACGGAGCGAATCGTATCGGGATTGGCTGAAACCATCCCCGATTTGCTTATCGTCAGCGGACTG
GCGTACGGCGTCGATGTCGCAGCTCATAAGGCCGCTTTGGACAATGGCTTGCCCACTGTAGCTGTATTGGCCCATGGATT
GGACAGGATTTATCCGAGCGGTCATCGTTCCATTGCTATGGAGATGCTCCGAAACGGAGGCTTGCTCACGGATTACCCTA
TGGGGACTGAACCGGAGCGATTCAATTTCGTCGGTCGCAATCGCATCGTAGCAGGCTTGTCGGACGCCACACTTGTGATC
GAATCGGCCGAAAAAGGAGGCTCCCTCATCACTGCCGGACTGGCATTCGGCTACAATCGCGAAGTACTGGCTCTACCCGG
ACGAGCCACGGATAGCCGTTCGGCCGGCTGCAATGCCTTGATAAGGGATCAAAAAGCCGCGCTTGTCAGCTCGGCTCAAG
ATGTGCTGACGCTGCTCGATTGGAGTTCTACCATAGACGCCAAACCTCAGACATTGAATTTCCGTCCCGATAGTTGGCCG
GATACCCCCGTAGCCGAATGTCTTCTCAGAGCAGGCACAGCCTCGGTGGACGAGCTGACACGCGCTACCGGACTACCTAT
AAACGATGTTTCTGCTCAGCTTTTCGACCTCGAATTGGACGGACTGGTACAGTCTCAGCCCGGTGGCATATACTCCGTTA
TATAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (328-369)

• DNA recombination-mediator protein A (DNA_processg_A) (83-289)

3D structure

• AlphaFold DB: Q7MXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	37.027	98.93	0.366