Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KHA74_RS07175 Genome accession   NZ_CP074348
Coordinates   1413964..1414428 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SW5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1408964..1419428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KHA74_RS07155 (KHA74_07120) - 1409444..1411264 (+) 1821 WP_094032395.1 PAS domain-containing protein -
  KHA74_RS07160 (KHA74_07125) - 1411289..1412458 (-) 1170 WP_015417364.1 aminotransferase A -
  KHA74_RS07165 (KHA74_07130) - 1412659..1412820 (-) 162 WP_007409608.1 hypothetical protein -
  KHA74_RS07170 (KHA74_07135) cheV 1413009..1413920 (+) 912 WP_015417365.1 chemotaxis protein CheV -
  KHA74_RS07175 (KHA74_07140) kre 1413964..1414428 (-) 465 WP_003154622.1 YkyB family protein Regulator
  KHA74_RS07180 (KHA74_07145) - 1414551..1415843 (-) 1293 WP_094032396.1 MFS transporter -
  KHA74_RS07185 (KHA74_07150) - 1415919..1416413 (-) 495 WP_094032461.1 L,D-transpeptidase family protein -
  KHA74_RS07190 (KHA74_07155) - 1416488..1417351 (-) 864 WP_094032397.1 metallophosphoesterase -
  KHA74_RS07195 (KHA74_07160) fadH 1417496..1418260 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  KHA74_RS07200 (KHA74_07165) - 1418374..1418922 (+) 549 WP_094032398.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=564063 KHA74_RS07175 WP_003154622.1 1413964..1414428(-) (kre) [Bacillus velezensis strain SW5]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=564063 KHA74_RS07175 WP_003154622.1 1413964..1414428(-) (kre) [Bacillus velezensis strain SW5]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929