Detailed information NTG0564043

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KHA74_RS02020
• Genome accession: NZ_CP074348
• Coordinates: 431708..432856 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SW5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 426708..437856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHA74_RS02000 (KHA74_01980)	-	427108..427791 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
KHA74_RS02005 (KHA74_01985)	-	427806..429242 (-)	1437	WP_094032072.1	ABC transporter permease	-
KHA74_RS02010 (KHA74_01990)	-	429455..430138 (+)	684	WP_007410267.1	response regulator transcription factor	-
KHA74_RS02015 (KHA74_01995)	-	430125..431546 (+)	1422	WP_195182934.1	HAMP domain-containing sensor histidine kinase	-
KHA74_RS02020 (KHA74_02000)	rapC	431708..432856 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
KHA74_RS02025 (KHA74_02005)	phrC	432840..432959 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KHA74_RS02030 (KHA74_02010)	-	433108..433203 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
KHA74_RS02035 (KHA74_02015)	-	433298..434662 (-)	1365	WP_199022338.1	aspartate kinase	-
KHA74_RS02040 (KHA74_02020)	ceuB	435076..436029 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
KHA74_RS02045 (KHA74_02025)	-	436019..436966 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
KHA74_RS02050 (KHA74_02030)	-	436960..437718 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=564043 KHA74_RS02020 WP_007410270.1 431708..432856(+) (rapC) [Bacillus velezensis strain SW5]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=564043 KHA74_RS02020 WP_007410270.1 431708..432856(+) (rapC) [Bacillus velezensis strain SW5]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568