Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   L8E65_RS10225 Genome accession   NZ_CP091880
Coordinates   2183953..2184309 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain US449     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2178953..2189309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L8E65_RS10200 (L8E65_10195) fabF 2179165..2180409 (+) 1245 WP_058157145.1 beta-ketoacyl-ACP synthase II -
  L8E65_RS10205 (L8E65_10200) pabC 2180409..2181224 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  L8E65_RS10210 (L8E65_10205) mltG 2181230..2182279 (+) 1050 WP_003104128.1 endolytic transglycosylase MltG -
  L8E65_RS10215 (L8E65_10210) tmk 2182308..2182940 (+) 633 WP_003122486.1 dTMP kinase -
  L8E65_RS10220 (L8E65_10215) - 2182933..2183919 (+) 987 WP_047689779.1 DNA polymerase III subunit delta' -
  L8E65_RS10225 (L8E65_10220) pilZ 2183953..2184309 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  L8E65_RS10230 (L8E65_10225) - 2184324..2185100 (+) 777 WP_003091117.1 TatD family hydrolase -
  L8E65_RS10235 (L8E65_10230) - 2185326..2186458 (-) 1133 Protein_2021 aminotransferase class V-fold PLP-dependent enzyme -
  L8E65_RS10240 (L8E65_10235) - 2186544..2187182 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  L8E65_RS10245 (L8E65_10240) - 2187332..2188228 (+) 897 WP_009876750.1 radical SAM protein -
  L8E65_RS10250 (L8E65_10245) - 2188293..2188925 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=563979 L8E65_RS10225 WP_003091119.1 2183953..2184309(+) (pilZ) [Pseudomonas aeruginosa strain US449]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=563979 L8E65_RS10225 WP_003091119.1 2183953..2184309(+) (pilZ) [Pseudomonas aeruginosa strain US449]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449