Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | PA8380_RS02080 | Genome accession | NZ_AP014839 |
| Coordinates | 445402..445767 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain 8380 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 440402..450767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA8380_RS02050 (PA8380_04180) | pyrR | 441024..441536 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| PA8380_RS02055 (PA8380_04190) | ruvX | 441648..442082 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| PA8380_RS02060 (PA8380_04200) | - | 442082..442651 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| PA8380_RS02065 (PA8380_04210) | - | 442700..443593 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| PA8380_RS02070 (PA8380_04220) | gshB | 443740..444693 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| PA8380_RS02075 (PA8380_04230) | pilG | 444948..445355 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| PA8380_RS02080 (PA8380_04240) | pilH | 445402..445767 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| PA8380_RS02085 (PA8380_04250) | - | 445818..446354 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| PA8380_RS02090 (PA8380_04260) | pilJ | 446439..448487 (+) | 2049 | WP_017148569.1 | chemotaxis chemoreceptor PilJ | - |
| PA8380_RS02095 (PA8380_04270) | pilK | 448548..449423 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=56382 PA8380_RS02080 WP_003084587.1 445402..445767(+) (pilH) [Pseudomonas aeruginosa strain 8380]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=56382 PA8380_RS02080 WP_003084587.1 445402..445767(+) (pilH) [Pseudomonas aeruginosa strain 8380]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |