Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KGP25_RS08145 Genome accession   NZ_CP074170
Coordinates   1729955..1730581 (+) Length   208 a.a.
NCBI ID   WP_023618860.1    Uniprot ID   A0A155YQ93
Organism   Enterobacter sp. JBIWA003     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724955..1735581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGP25_RS08125 (KGP25_08095) - 1725353..1727113 (-) 1761 WP_069719498.1 Lon protease family protein -
  KGP25_RS08130 (KGP25_08100) matP 1727300..1727752 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  KGP25_RS08135 (KGP25_08105) ompA 1727819..1728874 (-) 1056 WP_008499928.1 porin OmpA -
  KGP25_RS08140 (KGP25_08110) sulA 1729228..1729737 (-) 510 WP_032637628.1 SOS-induced cell division inhibitor SulA -
  KGP25_RS08145 (KGP25_08115) sxy/tfoX 1729955..1730581 (+) 627 WP_023618860.1 TfoX/Sxy family DNA transformation protein Regulator
  KGP25_RS08150 (KGP25_08120) yccS 1730538..1732700 (-) 2163 WP_111966972.1 YccS family putative transporter -
  KGP25_RS08155 (KGP25_08125) - 1732720..1733166 (-) 447 WP_196364792.1 YccF domain-containing protein -
  KGP25_RS08160 (KGP25_08130) helD 1733290..1735344 (+) 2055 WP_045908362.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23898.49 Da        Isoelectric Point: 9.6439

>NTDB_id=563748 KGP25_RS08145 WP_023618860.1 1729955..1730581(+) (sxy/tfoX) [Enterobacter sp. JBIWA003]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQESRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=563748 KGP25_RS08145 WP_023618860.1 1729955..1730581(+) (sxy/tfoX) [Enterobacter sp. JBIWA003]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGCGGCTACACCCTGGCGGTGGATGATGCGGTCTTTGCCATGGTGTCCGATGGCGAACTTTATCTTCGTGCGTGTG
AGGAGAGTGCAAAATACTGTGTAAAAAACGCCTCCTCCTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGAGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
GAAAGAGCGCTACCAGCGTCATCAACGAAACCGTCTTAAGGATCTGCCGAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCCGGTATCACCAATGAAGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAGAAT
AAAGCGCTCAGTATTAAAGTTCTCTTTGCGCTGGAAGGGGCTATCGAAGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
CCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAGTCGTTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A155YQ93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567