Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KGP22_RS07550 Genome accession   NZ_CP074159
Coordinates   1615861..1616487 (+) Length   208 a.a.
NCBI ID   WP_111964542.1    Uniprot ID   -
Organism   Enterobacter sp. JBIWA005     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1610861..1621487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGP22_RS07530 (KGP22_07500) - 1611259..1613019 (-) 1761 WP_111964543.1 Lon protease family protein -
  KGP22_RS07535 (KGP22_07505) matP 1613206..1613658 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  KGP22_RS07540 (KGP22_07510) ompA 1613724..1614779 (-) 1056 WP_023311028.1 porin OmpA -
  KGP22_RS07545 (KGP22_07515) sulA 1615134..1615643 (-) 510 WP_111964573.1 SOS-induced cell division inhibitor SulA -
  KGP22_RS07550 (KGP22_07520) sxy/tfoX 1615861..1616487 (+) 627 WP_111964542.1 TfoX/Sxy family DNA transformation protein Regulator
  KGP22_RS07555 (KGP22_07525) yccS 1616444..1618606 (-) 2163 WP_223581789.1 YccS family putative transporter -
  KGP22_RS07560 (KGP22_07530) - 1618626..1619072 (-) 447 WP_149366288.1 YccF domain-containing protein -
  KGP22_RS07565 (KGP22_07535) helD 1619196..1621250 (+) 2055 WP_111964539.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24041.64 Da        Isoelectric Point: 8.8764

>NTDB_id=563703 KGP22_RS07550 WP_111964542.1 1615861..1616487(+) (sxy/tfoX) [Enterobacter sp. JBIWA005]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEEMLRELGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALTEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=563703 KGP22_RS07550 WP_111964542.1 1615861..1616487(+) (sxy/tfoX) [Enterobacter sp. JBIWA005]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGTGAGATTCATCACCGCGCGTT
GTTTGGAGGCTATACCCTCGCGGTGGATGATGCGGTTTTTGCCATGGTCTCAGACGGCGAGCTTTATCTTCGCGCCTGTG
AGGAAAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTACTTCAGCTCTCCTCGTTTGCACTCAGTGCGGCAAG
AAAAGAGCGTTATCAGCGCCATCAACGAAACCGACTCAAAGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAATGTTGCGGGAGCTTGGTGCCAGGGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTGAGTATAAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAAGCGGCACTCCCGGCAGACAT
TCGCCGGGAGCTCACGGAGTGGTTTAATGCGTTGACTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.794

95.673

0.563