Detailed information NTG0563663

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L7H17_RS15590
• Genome accession: NZ_CP091836
• Coordinates: 3222060..3223085 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SWYHX138.33gt
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3217060..3228085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L7H17_RS15560 (L7H17_15560)	zapB	3217144..3217389 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L7H17_RS15565 (L7H17_15565)	rraA	3217474..3217959 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L7H17_RS15570 (L7H17_15570)	menA	3218052..3218978 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L7H17_RS15575 (L7H17_15575)	hslU	3219045..3220376 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L7H17_RS15580 (L7H17_15580)	hslV	3220386..3220916 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L7H17_RS15585 (L7H17_15585)	ftsN	3221009..3221968 (-)	960	WP_000068828.1	cell division protein FtsN	-
L7H17_RS15590 (L7H17_15590)	cytR	3222060..3223085 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L7H17_RS15595 (L7H17_15595)	priA	3223241..3225439 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
L7H17_RS15600 (L7H17_15600)	rpmE	3225642..3225854 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L7H17_RS15605 (L7H17_15605)	yiiX	3225915..3226523 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
L7H17_RS15610 (L7H17_15610)	metJ	3226707..3227024 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=563663 L7H17_RS15590 WP_000644904.1 3222060..3223085(-) (cytR) [Escherichia coli strain SWYHX138.33gt]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=563663 L7H17_RS15590 WP_000644904.1 3222060..3223085(-) (cytR) [Escherichia coli strain SWYHX138.33gt]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628