Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KGP24_RS08065 Genome accession   NZ_CP074149
Coordinates   1681072..1681698 (+) Length   208 a.a.
NCBI ID   WP_223562957.1    Uniprot ID   -
Organism   Enterobacter sp. JBIWA008     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1676072..1686698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGP24_RS08045 (KGP24_08035) - 1676471..1678231 (-) 1761 WP_223562954.1 Lon protease family protein -
  KGP24_RS08050 (KGP24_08040) matP 1678418..1678870 (+) 453 WP_223562955.1 macrodomain Ter protein MatP -
  KGP24_RS08055 (KGP24_08045) ompA 1678935..1679990 (-) 1056 WP_223562956.1 porin OmpA -
  KGP24_RS08060 (KGP24_08050) sulA 1680345..1680854 (-) 510 WP_121425762.1 SOS-induced cell division inhibitor SulA -
  KGP24_RS08065 (KGP24_08055) sxy/tfoX 1681072..1681698 (+) 627 WP_223562957.1 TfoX/Sxy family DNA transformation protein Regulator
  KGP24_RS08070 (KGP24_08060) yccS 1681655..1683817 (-) 2163 WP_223562958.1 YccS family putative transporter -
  KGP24_RS08075 (KGP24_08065) - 1683837..1684283 (-) 447 WP_023311032.1 YccF domain-containing protein -
  KGP24_RS08080 (KGP24_08070) helD 1684407..1686461 (+) 2055 WP_223562959.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23950.47 Da        Isoelectric Point: 9.2151

>NTDB_id=563658 KGP24_RS08065 WP_223562957.1 1681072..1681698(+) (sxy/tfoX) [Enterobacter sp. JBIWA008]
MKKISYERIYKSQEYLSPLGDIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCAKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIVGLHEAALPADIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=563658 KGP24_RS08065 WP_223562957.1 1681072..1681698(+) (sxy/tfoX) [Enterobacter sp. JBIWA008]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTTTCACCGCTGGGCGATATTCATCATCGCGCACT
GTTTGGAGGCTACACCCTCGCGGTAGATGATGCGGTTTTTGCCATGGTTTCTGATGGTGAACTTTATCTCCGTGCCTGTG
AGGAGAGTGCGAAATACTGTGCGAAAAATGCCTCTTCTTTTTTGACGTTGATGAAGCGAGGCCGTCCTGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGAGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAGCGAAACCGCCTAAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAACGCTGCGGGAGCTTGGTGCCAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTTGCGCTGGAAGGGGCTATCGTGGGGCTGCATGAGGCGGCACTCCCGGCAGACAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562