Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   L2I08_RS28005 Genome accession   NZ_CP091820
Coordinates   6423244..6424365 (+) Length   373 a.a.
NCBI ID   WP_003948877.1    Uniprot ID   A0ABR4S230
Organism   Streptomyces sp. NBU3104     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6418244..6429365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2I08_RS27985 (L2I08_27985) - 6418670..6418891 (-) 222 WP_018469953.1 hypothetical protein -
  L2I08_RS27990 (L2I08_27990) - 6419005..6420747 (-) 1743 WP_217383886.1 sigma factor-like helix-turn-helix DNA-binding protein -
  L2I08_RS27995 (L2I08_27995) - 6421026..6421601 (+) 576 WP_003948874.1 dihydrofolate reductase family protein -
  L2I08_RS28000 (L2I08_28000) radA/sms 6421655..6423073 (+) 1419 WP_003948876.1 DNA repair protein RadA Machinery gene
  L2I08_RS28005 (L2I08_28005) disA 6423244..6424365 (+) 1122 WP_003948877.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  L2I08_RS28010 (L2I08_28010) - 6424447..6425271 (-) 825 WP_237897035.1 hypothetical protein -
  L2I08_RS28015 (L2I08_28015) - 6425627..6426376 (+) 750 WP_008404973.1 phosphatase PAP2 family protein -
  L2I08_RS28020 (L2I08_28020) - 6426489..6427541 (+) 1053 WP_237897036.1 A/G-specific adenine glycosylase -
  L2I08_RS28025 (L2I08_28025) - 6427759..6428298 (+) 540 WP_003948881.1 SigE family RNA polymerase sigma factor -
  L2I08_RS28030 (L2I08_28030) - 6428319..6428987 (+) 669 WP_018895477.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40243.11 Da        Isoelectric Point: 5.1034

>NTDB_id=563598 L2I08_RS28005 WP_003948877.1 6423244..6424365(+) (disA) [Streptomyces sp. NBU3104]
MAANDRATAPGKSGGPGADGLMRASLSAVAPGTQLRDGLERILRGNTGGLIVLGWDRTVESMCTGGFVLDVEFSATRLRE
LCKLDGGIVLDKDLTKILRAGVQLVPDPTIPTDETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIAAEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALAELGKLSHTELLELPVVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=563598 L2I08_RS28005 WP_003948877.1 6423244..6424365(+) (disA) [Streptomyces sp. NBU3104]
GTGGCAGCCAATGACCGGGCAACGGCCCCCGGCAAGTCCGGCGGGCCCGGTGCCGACGGGCTGATGCGTGCCTCGCTGAG
CGCCGTCGCCCCCGGCACCCAGCTGCGGGACGGGCTGGAGCGGATTCTGCGGGGGAACACCGGCGGACTCATCGTGCTCG
GCTGGGACAGGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCTCGGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGAGTCCAGCTCGTCCCCGA
CCCGACCATCCCCACCGACGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCAACTTCCCCGTGG
TCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCCGCCATC
CTCTCCCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACGCTCTCGGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCGCCG
CCGAGATCGCCGAGTACGTGGTGGAACTGGGCACCGACGGGCGCCTGCTCGCCCTCCAGCTGGACGAGCTGATCGCCGGC
GTCGAGCCCGAACGCGAGCTGGTCGTCCGGGACTACGTGCCGGAACCCACGGCGAAGCGTTCCCGGACGGTGGACGAGGC
GCTGGCGGAGCTGGGCAAGCTCAGCCACACCGAGCTGCTCGAACTGCCCGTGGTGGCGCGGGCGCTCGGCTACACCGGCT
CGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGGCTGCCCGGGGCCATC
ATCGACCGGCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCCAGTGTGGACGACCTCCAGACGGTGGACGG
CGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.761

0.432