Detailed information NTG0056358

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BAM5036_RS05480
• Genome accession: NC_020410
• Coordinates: 1072862..1073815 (+)
• Length: 317 a.a.
• NCBI ID: WP_015417205.1
• Uniprot ID: -
• Organism: Bacillus velezensis UCMB5036
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1067862..1078815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAM5036_RS05450 (BAM5036_1025)	argF	1069680..1070651 (+)	972	WP_015417202.1	ornithine carbamoyltransferase	-
BAM5036_RS05455 (BAM5036_1026)	-	1070727..1070906 (+)	180	WP_003155070.1	YjzC family protein	-
BAM5036_RS05460 (BAM5036_1027)	-	1070943..1071128 (-)	186	WP_003155069.1	YjzD family protein	-
BAM5036_RS05470 (BAM5036_1028)	-	1071389..1072123 (+)	735	WP_015417203.1	hypothetical protein	-
BAM5036_RS05475 (BAM5036_1029)	-	1072206..1072772 (+)	567	WP_015417204.1	NAD(P) binding enzyme	-
BAM5036_RS05480 (BAM5036_1030)	med	1072862..1073815 (+)	954	WP_015417205.1	BMP family ABC transporter substrate-binding protein	Regulator
BAM5036_RS05485 (BAM5036_1031)	comZ	1073828..1074019 (+)	192	WP_003155061.1	ComZ family protein	Regulator
BAM5036_RS05490 (BAM5036_1032)	-	1074048..1074266 (-)	219	WP_007409123.1	hypothetical protein	-
BAM5036_RS05495 (BAM5036_1033)	-	1074433..1075371 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
BAM5036_RS05500 (BAM5036_1034)	fabF	1075394..1076632 (+)	1239	WP_015417206.1	beta-ketoacyl-ACP synthase II	-
BAM5036_RS05505 (BAM5036_1035)	-	1076716..1077501 (+)	786	WP_007409120.1	DUF2268 domain-containing protein	-
BAM5036_RS05510 (BAM5036_1036)	-	1077675..1078661 (+)	987	WP_012117279.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35328.96 Da
• Isoelectric Point: 4.6686

>NTDB_id=56358 BAM5036_RS05480 WP_015417205.1 1072862..1073815(+) (med) [Bacillus velezensis UCMB5036]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=56358 BAM5036_RS05480 WP_015417205.1 1072862..1073815(+) (med) [Bacillus velezensis UCMB5036]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782