Detailed information NTG0563462

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6V99_RS00860
• Genome accession: NZ_CP091773
• Coordinates: 180295..181278 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain SWYH.B349aT
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 175295..186278

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6V99_RS00845 (L6V99_00845)	dppA	176438..178045 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
L6V99_RS00850 (L6V99_00850)	dppB	178353..179372 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L6V99_RS00855 (L6V99_00855)	dppC	179382..180284 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6V99_RS00860 (L6V99_00860)	amiE	180295..181278 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6V99_RS00865 (L6V99_00865)	dppF	181275..182279 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6V99_RS00870 (L6V99_00870)	yhjV	182309..183580 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
L6V99_RS00875 (L6V99_00875)	-	184056..184163 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6V99_RS00880 (L6V99_00880)	-	184539..184646 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6V99_RS00885 (L6V99_00885)	-	185022..185129 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6V99_RS00890 (L6V99_00890)	-	185505..185612 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=563462 L6V99_RS00860 WP_001196486.1 180295..181278(+) (amiE) [Escherichia coli strain SWYH.B349aT]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=563462 L6V99_RS00860 WP_001196486.1 180295..181278(+) (amiE) [Escherichia coli strain SWYH.B349aT]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404