Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   KFQ09_RS14070 Genome accession   NZ_CP074101
Coordinates   2778598..2779239 (+) Length   213 a.a.
NCBI ID   WP_007500477.1    Uniprot ID   -
Organism   Bacillus sp. FS02     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2773598..2784239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS14045 - 2773988..2774341 (-) 354 WP_017358939.1 hypothetical protein -
  KFQ09_RS14050 degQ 2774847..2774987 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  KFQ09_RS14055 - 2775139..2776062 (+) 924 WP_326849155.1 polyprenyl synthetase family protein -
  KFQ09_RS14060 comX 2776040..2776219 (+) 180 WP_039963855.1 competence pheromone ComX -
  KFQ09_RS14065 comP 2776226..2778517 (+) 2292 WP_255835772.1 ATP-binding protein Regulator
  KFQ09_RS14070 comA 2778598..2779239 (+) 642 WP_007500477.1 response regulator transcription factor Regulator
  KFQ09_RS14075 - 2779263..2779652 (+) 390 WP_017358943.1 hotdog fold thioesterase -
  KFQ09_RS14080 mnhG 2779743..2780117 (-) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  KFQ09_RS14085 - 2780101..2780382 (-) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  KFQ09_RS14090 - 2780382..2780861 (-) 480 WP_017358944.1 Na+/H+ antiporter subunit E -
  KFQ09_RS14095 - 2780868..2782346 (-) 1479 WP_255835773.1 Na+/H+ antiporter subunit D -
  KFQ09_RS14100 - 2782339..2782680 (-) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  KFQ09_RS14105 - 2782680..2783111 (-) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24140.53 Da        Isoelectric Point: 4.5688

>NTDB_id=563281 KFQ09_RS14070 WP_007500477.1 2778598..2779239(+) (comA) [Bacillus sp. FS02]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEGAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=563281 KFQ09_RS14070 WP_007500477.1 2778598..2779239(+) (comA) [Bacillus sp. FS02]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGGCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATCTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCCAAACAAATTCTAGAAACGAATCAACAAGTGAAAATTATC
ATTTATACAGGATATGAAGTAGATGATTATTTCGAAGAGGCCATTCGAGCTGGATTGCATGGTGCAATAAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAGAAGCCAGAACAGGCACAGCAGACGGATCATGAGCTGTTAACAGAGCGTGAATGTTTAATC
TTAAGAGAAGTGGAAAAAGGGTACACAAACCAAGAGATCGCCGATGTGCTTCATTTGAGCAAACGCTCGATTGAATACAG
TTTGACCTCCATCTTTAATAAGCTGAATGTTGGATCTCGAACAGAAGCGGTGTTAATTGCAAAATCGGAAAGTGTCCTGT
AA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-207)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718