Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   KFQ09_RS07655 Genome accession   NZ_CP074101
Coordinates   1524818..1525246 (+) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus sp. FS02     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1519818..1530246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS07645 - 1520407..1522392 (-) 1986 WP_035390499.1 hydantoinase B/oxoprolinase family protein -
  KFQ09_RS07650 - 1522382..1524451 (-) 2070 WP_255836186.1 hydantoinase/oxoprolinase family protein -
  KFQ09_RS07655 nucA/comI 1524818..1525246 (+) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  KFQ09_RS07660 - 1525373..1527070 (+) 1698 WP_048002413.1 methyl-accepting chemotaxis protein -
  KFQ09_RS07665 comJ 1527208..1527594 (+) 387 WP_050826928.1 competence protein ComJ -
  KFQ09_RS07670 - 1527596..1528402 (-) 807 WP_110487710.1 aminoglycoside N(3)-acetyltransferase -
  KFQ09_RS07675 - 1528427..1528846 (-) 420 WP_008347846.1 Lrp/AsnC family transcriptional regulator -
  KFQ09_RS07680 - 1528962..1529726 (+) 765 WP_046342598.1 MBL fold metallo-hydrolase -
  KFQ09_RS07685 - 1529773..1530102 (-) 330 WP_017366586.1 YckD family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=563262 KFQ09_RS07655 WP_007498233.1 1524818..1525246(+) (nucA/comI) [Bacillus sp. FS02]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=563262 KFQ09_RS07655 WP_007498233.1 1524818..1525246(+) (nucA/comI) [Bacillus sp. FS02]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCAATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514