Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KFQ09_RS05485 Genome accession   NZ_CP074101
Coordinates   1057390..1058181 (-) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus sp. FS02     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1052390..1063181
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS05460 - 1054987..1055970 (-) 984 WP_008341983.1 glycosyltransferase family 2 protein -
  KFQ09_RS05465 - 1056272..1056544 (-) 273 WP_017358840.1 YfhJ family protein -
  KFQ09_RS05470 - 1056661..1056810 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  KFQ09_RS05475 - 1056836..1057009 (+) 174 WP_003217811.1 YpzG family protein -
  KFQ09_RS05480 - 1057072..1057386 (-) 315 WP_007496702.1 YfhH family protein -
  KFQ09_RS05485 recX 1057390..1058181 (-) 792 WP_017358838.1 recombination regulator RecX Regulator
  KFQ09_RS05490 - 1058277..1059173 (+) 897 WP_255836079.1 TIGR01777 family oxidoreductase -
  KFQ09_RS05495 - 1059226..1059336 (+) 111 WP_017358836.1 YfhE family protein -
  KFQ09_RS05500 - 1059398..1059553 (+) 156 WP_255836080.1 YfhD family protein -
  KFQ09_RS05505 - 1059590..1060177 (-) 588 WP_034646352.1 nitroreductase -
  KFQ09_RS05510 - 1060448..1061704 (+) 1257 WP_035391280.1 transcriptional regulator -
  KFQ09_RS05515 - 1061740..1062207 (-) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  KFQ09_RS05520 - 1062546..1063094 (-) 549 WP_116307659.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=563260 KFQ09_RS05485 WP_017358838.1 1057390..1058181(-) (recX) [Bacillus sp. FS02]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=563260 KFQ09_RS05485 WP_017358838.1 1057390..1058181(-) (recX) [Bacillus sp. FS02]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAATACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCTTTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635