Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   KFQ09_RS04490 Genome accession   NZ_CP074101
Coordinates   875055..875633 (-) Length   192 a.a.
NCBI ID   WP_017366958.1    Uniprot ID   A0A5D4P9G2
Organism   Bacillus sp. FS02     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 870055..880633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS04465 - 870153..871322 (-) 1170 WP_017360232.1 MFS transporter -
  KFQ09_RS04470 - 871466..871759 (+) 294 WP_255836056.1 GntR family transcriptional regulator -
  KFQ09_RS04475 - 871789..872904 (+) 1116 WP_255836057.1 PLP-dependent aminotransferase family protein -
  KFQ09_RS04480 - 872935..873417 (-) 483 WP_255836058.1 hypothetical protein -
  KFQ09_RS04485 - 873805..874911 (-) 1107 WP_255836059.1 D-TA family PLP-dependent enzyme -
  KFQ09_RS04490 comK 875055..875633 (-) 579 WP_017366958.1 competence protein ComK Regulator
  KFQ09_RS04495 - 875923..876159 (+) 237 WP_008348804.1 IDEAL domain-containing protein -
  KFQ09_RS04500 - 876218..877078 (-) 861 WP_008348806.1 SDR family oxidoreductase -
  KFQ09_RS04505 - 877221..878753 (+) 1533 WP_008348809.1 FAD-dependent oxidoreductase -
  KFQ09_RS04510 - 878779..880140 (+) 1362 WP_370539267.1 globin-coupled sensor protein -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22348.40 Da        Isoelectric Point: 8.7996

>NTDB_id=563256 KFQ09_RS04490 WP_017366958.1 875055..875633(-) (comK) [Bacillus sp. FS02]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=563256 KFQ09_RS04490 WP_017366958.1 875055..875633(-) (comK) [Bacillus sp. FS02]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAATTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTATCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D4P9G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.458

100

0.615