Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KFQ09_RS04455 Genome accession   NZ_CP074101
Coordinates   868703..869653 (-) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus sp. FS02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 863703..874653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFQ09_RS04425 - 863978..864340 (+) 363 WP_017360224.1 hypothetical protein -
  KFQ09_RS04430 - 864427..864861 (+) 435 WP_057079729.1 hypothetical protein -
  KFQ09_RS04435 - 864896..865852 (-) 957 WP_048001719.1 LCP family protein -
  KFQ09_RS04440 - 866044..866988 (-) 945 WP_129548218.1 siderophore ABC transporter substrate-binding protein -
  KFQ09_RS04445 - 867011..867769 (-) 759 WP_056705126.1 ABC transporter ATP-binding protein -
  KFQ09_RS04450 - 867760..868710 (-) 951 WP_008348643.1 iron chelate uptake ABC transporter family permease subunit -
  KFQ09_RS04455 ceuB 868703..869653 (-) 951 WP_017366964.1 ABC transporter permease Machinery gene
  KFQ09_RS04460 - 869812..870090 (-) 279 WP_255836055.1 barstar family protein -
  KFQ09_RS04465 - 870153..871322 (-) 1170 WP_017360232.1 MFS transporter -
  KFQ09_RS04470 - 871466..871759 (+) 294 WP_255836056.1 GntR family transcriptional regulator -
  KFQ09_RS04475 - 871789..872904 (+) 1116 WP_255836057.1 PLP-dependent aminotransferase family protein -
  KFQ09_RS04480 - 872935..873417 (-) 483 WP_255836058.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=563255 KFQ09_RS04455 WP_017366964.1 868703..869653(-) (ceuB) [Bacillus sp. FS02]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=563255 KFQ09_RS04455 WP_017366964.1 868703..869653(-) (ceuB) [Bacillus sp. FS02]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494