Detailed information NTG0563247

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L6L57_RS00300
• Genome accession: NZ_CP091712
• Coordinates: 49850..50875 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KFu014
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 44850..55875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L57_RS00275 (L6L57_00275)	rraA	45264..45749 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L6L57_RS00280 (L6L57_00280)	menA	45842..46768 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L6L57_RS00285 (L6L57_00285)	hslU	46835..48166 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
L6L57_RS00290 (L6L57_00290)	hslV	48176..48706 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L6L57_RS00295 (L6L57_00295)	ftsN	48799..49758 (-)	960	WP_000068834.1	cell division protein FtsN	-
L6L57_RS00300 (L6L57_00300)	cytR	49850..50875 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L6L57_RS00305 (L6L57_00305)	priA	51031..53229 (-)	2199	WP_012311784.1	primosomal protein N'	Machinery gene
L6L57_RS00310 (L6L57_00310)	rpmE	53432..53644 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L6L57_RS00315 (L6L57_00315)	yiiX	53705..54313 (-)	609	WP_000702304.1	YiiX family permuted papain-like enzyme	-
L6L57_RS00320 (L6L57_00320)	metJ	54373..54690 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=563247 L6L57_RS00300 WP_000644904.1 49850..50875(-) (cytR) [Escherichia coli strain KFu014]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=563247 L6L57_RS00300 WP_000644904.1 49850..50875(-) (cytR) [Escherichia coli strain KFu014]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAGCACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628