Detailed information NTG0563245

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KFQ09_RS03030
• Genome accession: NZ_CP074101
• Coordinates: 594405..596510 (+)
• Length: 701 a.a.
• NCBI ID: WP_255836012.1
• Uniprot ID: -
• Organism: Bacillus sp. FS02
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 589405..601510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFQ09_RS03000	-	590028..590246 (-)	219	WP_017367128.1	hypothetical protein	-
KFQ09_RS03005	queF	590505..591002 (-)	498	WP_003211403.1	preQ(1) synthase	-
KFQ09_RS03010	queE	591020..591751 (-)	732	WP_019743916.1	7-carboxy-7-deazaguanine synthase QueE	-
KFQ09_RS03015	queD	591744..592184 (-)	441	WP_024719651.1	6-carboxytetrahydropterin synthase QueD	-
KFQ09_RS03020	queC	592185..592841 (-)	657	WP_008348090.1	7-cyano-7-deazaguanine synthase QueC	-
KFQ09_RS03025	-	593116..594159 (-)	1044	WP_206116159.1	hypothetical protein	-
KFQ09_RS03030	clpC	594405..596510 (+)	2106	WP_255836012.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
KFQ09_RS03035	motA	597074..597868 (+)	795	WP_008346088.1	flagellar motor stator protein MotA	-
KFQ09_RS03040	motB	597861..598625 (+)	765	WP_017367125.1	flagellar motor protein MotB	-
KFQ09_RS03045	-	598805..599260 (-)	456	WP_003211701.1	MarR family winged helix-turn-helix transcriptional regulator	-
KFQ09_RS03050	-	599465..600963 (+)	1499	Protein_610	ATP-binding protein	-
KFQ09_RS03055	-	601015..601257 (-)	243	WP_008346101.1	aspartyl-phosphate phosphatase Spo0E family protein	-

Sequence

Protein

• Length: 701 a.a.
• Molecular weight: 78208.83 Da
• Isoelectric Point: 5.1807

>NTDB_id=563245 KFQ09_RS03030 WP_255836012.1 594405..596510(+) (clpC) [Bacillus sp. FS02]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPNLFGGGSFFSEQAGHATSQERPKQKGLLDELGRN
LTDGAHAGLIDPVIGRDEEVTRVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIANGDVPNKLKNKQVYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVMVDEPTQDEAFEILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALNEERYEKAAKLRDEEEAIEARLQNKTNDKEHVVTAEDIQSIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSKEAIIRLDMSEYME
KHSVSKIIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSTDKKAVKVGFQSEQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDKDDLVKIVDLLLKDLSEQLKEQNLTVHI
TNEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTDILLEEEQLTGFTVDVEHDEIVVKKS

Nucleotide

• Length: 2106 bp

>NTDB_id=563245 KFQ09_RS03030 WP_255836012.1 594405..596510(+) (clpC) [Bacillus sp. FS02]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACGATTCGCCTGAATATGCAAGTAAATTCGTCCCGTAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAACAGTCAAAAATGAAAATGGGTCCTAACCTTTTCGGAGGCGGTTCAT
TCTTCTCTGAGCAAGCAGGACATGCGACGAGCCAAGAGCGGCCTAAACAAAAAGGCTTACTCGATGAGCTTGGCCGGAAC
TTAACGGATGGCGCACATGCTGGTTTAATCGATCCTGTCATTGGCCGTGATGAAGAAGTCACAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAACAATCCTGTCCTCATTGGTGAACCTGGTGTTGGTAAAACGGCCATAGCCGAAGGACTAGCTC
TAAAAATTGCAAATGGAGATGTACCAAATAAATTAAAGAACAAACAAGTTTATTTATTAGATGTCTCTTCACTTGTGGCA
AACACAGGTGTACGTGGTCAATTTGAGGAACGGATGAAGCAATTAATCAAAGAATTGCAAAGCCGTAAAAATATCATCTT
ATTCGTTGATGAAATTCATCTTCTTGTAGGCGCAGGCTCTGCCGAAGGGTCAATGGATGCCGGAAACATTTTGAAACCAG
CTCTAGCTCGAGGGGAACTGCAGCTAGTAGGTGCGACAACATTAAAAGAGTATCGTCAAATTGAAAAAGATGCTGCCCTT
GAACGCAGGTTCCAGCCTGTCATGGTTGATGAGCCAACACAGGATGAAGCATTCGAGATATTAAAAGGCATTCAAGATAA
GTATGAAGCCTATCATGGTGTCACCTATTCTGACGAAGCCATTAAAGCGTGTGTTCAATTATCTTCGCGGTATATTCAAG
ACCGCCACTTGCCAGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAATCTCTCCATTGATGCAGCAAGT
GAAGATGAATTAACAAACCGTCTTGCGCAAATTGCCGCTGAAAAACAAGCTGCTTTAAATGAAGAACGATATGAAAAAGC
AGCGAAGCTTCGAGACGAAGAAGAAGCGATTGAAGCGAGATTGCAAAACAAAACAAATGACAAAGAACATGTCGTCACAG
CTGAGGACATTCAGTCGATTGTAGAACAAAAAACAGGTATCCCTGTTGGCAAACTGCAAGCAGACGAACAAACAAAAATG
AAAGAAATTGATGTCCGCTTAAAAGCCCGTGTCATTGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCCGTAAAAAG
AAGCAGAGCCGGCTTAAAATCAAAACACAGACCAACTGGCTCCTTCCTTTTCGTTGGACCAACAGGCGTCGGGAAAACCG
AATTGTCTAAAACATTAGCGGAAGAATTATTTGGCTCAAAAGAAGCGATCATTCGTTTAGATATGAGTGAATACATGGAG
AAACACTCCGTGTCCAAAATCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCCGGACAGCTCACGGAAAAGGT
TCGCAGAAAACCATACAGCATCATTTTGCTCGATGAAATCGAAAAAGCGCACCCTGATGTCCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGTCTAACAGACAGCCAAGGCAGAACCGTCAGCTTTAAAGACACAGTTATCATTATGACAAGTAAC
GCTGGCAGCACAGATAAAAAAGCAGTCAAAGTCGGATTCCAGTCTGAACAAGAAGAAGCCATCGAAGAACAATCATTGAT
TGATTCACTGAGCGCTTATTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGATAAAG
ACGATTTAGTCAAAATTGTGGATCTTCTGCTCAAAGATTTGTCAGAGCAGTTAAAAGAACAAAATCTAACTGTTCACATC
ACAAACGAAGCGAAAGAAAAAATCGCTGAACTTGGTTACCATCCAGCATTTGGGGCTCGTCCGTTACGAAGAACGATTCA
AGAGCATGTTGAGGATCAAATGACGGACATCTTGCTTGAAGAAGAACAACTTACTGGATTTACAGTCGATGTTGAACATG
ACGAAATTGTTGTGAAAAAGAGCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (611-686)

• ATPase family associated with various cellular activities (AAA) (AAA) (116-245)

• AAA lid domain (AAA_lid_9) (253-353)

• AAA domain (Cdc48 subfamily) (AAA_2) (437-605)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	56.834	100	0.599
clpE	Streptococcus mutans UA159	56.376	100	0.599
clpE	Streptococcus pneumoniae Rx1	55.708	100	0.578
clpE	Streptococcus pneumoniae D39	55.708	100	0.578
clpE	Streptococcus pneumoniae R6	55.708	100	0.578
clpE	Streptococcus pneumoniae TIGR4	55.708	100	0.578
clpC	Bacillus subtilis subsp. subtilis str. 168	53.651	95.72	0.514
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.855	90.728	0.425
clpC	Streptococcus thermophilus LMD-9	44.427	92.154	0.409
clpC	Streptococcus thermophilus LMG 18311	44.272	92.154	0.408
clpC	Streptococcus pneumoniae TIGR4	44.479	90.442	0.402
clpC	Streptococcus pneumoniae Rx1	44.674	89.729	0.401
clpC	Streptococcus pneumoniae D39	44.674	89.729	0.401
clpC	Streptococcus mutans UA159	44.127	89.872	0.397