Detailed information NTG0563121

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6L60_RS13495
• Genome accession: NZ_CP091703
• Coordinates: 2835447..2836430 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain KOr021
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2830447..2841430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L60_RS13470 (L6L60_13470)	-	2831595..2831702 (-)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L60_RS13475 (L6L60_13475)	-	2832078..2832185 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L60_RS13480 (L6L60_13480)	-	2832562..2832669 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L60_RS13485 (L6L60_13485)	yhjV	2833145..2834416 (+)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
L6L60_RS13490 (L6L60_13490)	dppF	2834446..2835450 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6L60_RS13495 (L6L60_13495)	amiE	2835447..2836430 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6L60_RS13500 (L6L60_13500)	dppC	2836441..2837343 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6L60_RS13505 (L6L60_13505)	dppB	2837353..2838372 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L6L60_RS13510 (L6L60_13510)	dppA	2838523..2840130 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=563121 L6L60_RS13495 WP_001196487.1 2835447..2836430(-) (amiE) [Escherichia coli strain KOr021]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=563121 L6L60_RS13495 WP_001196487.1 2835447..2836430(-) (amiE) [Escherichia coli strain KOr021]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407