Detailed information NTG0563075

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: KFZ67_RS12370
• Genome accession: NZ_CP074080
• Coordinates: 2670873..2674265 (+)
• Length: 1130 a.a.
• NCBI ID: WP_284660261.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain Pdd0210
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2665873..2679265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFZ67_RS12355 (KFZ67_12335)	hemL	2666587..2667879 (+)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-
KFZ67_RS12360 (KFZ67_12340)	-	2668252..2669340 (+)	1089	WP_109375285.1	AI-2E family transporter	-
KFZ67_RS12365 (KFZ67_12345)	rsmC	2669540..2670559 (+)	1020	WP_284660260.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
KFZ67_RS12370 (KFZ67_12350)	chiS	2670873..2674265 (+)	3393	WP_284660261.1	response regulator	Regulator
KFZ67_RS12375 (KFZ67_12355)	-	2674966..2676642 (+)	1677	WP_068946919.1	ABC transporter substrate-binding protein	-
KFZ67_RS12380 (KFZ67_12360)	-	2676789..2677775 (+)	987	WP_065172285.1	ABC transporter permease	-
KFZ67_RS12385 (KFZ67_12365)	-	2677778..2678803 (+)	1026	WP_068969481.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127140.23 Da
• Isoelectric Point: 6.6791

>NTDB_id=563075 KFZ67_RS12370 WP_284660261.1 2670873..2674265(+) (chiS) [Photobacterium damselae strain Pdd0210]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLSQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTREQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELAQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=563075 KFZ67_RS12370 WP_284660261.1 2670873..2674265(+) (chiS) [Photobacterium damselae strain Pdd0210]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGTACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAGCCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGAGCAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATACCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTATTCCGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGGGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TCCCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCAATCATTCAA
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATCGCAACCTTACTGGCCGATAAACCGCAAAA
TGGGCAAACGGTTCAAACTCTATTAGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TAATCAGCCCAGCCATCAACCAAGCACTTGCAGGTAAAACTGGGGTAGGCAGTTTACTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCGGAGCGAGTCTCTGCAGGCGATCTAGAACAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGTCGTCTTGCCACTAGCTTTGCTCGTATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATTAGCAAGCAAAATCAAGAGCTTGAAAAAAATATTCACGTAATCAAACAACAAAATGATGATCTGCAAA
CCGCCGATAAACTAAAAGATGAGTTCTTAGCGACAACCTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCTATGCAAGGAGCCCAACGTCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGTCTAACGAACTTAGTTGATGATTTACTCGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CGGTCGATCTTGCCAGCGCTGTTCGGTTAGTCCTTGAATTATCAGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGACAAGGAATTCCAGCAGAACAACTTGAACATATCTTTGAACCACTGGTACAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGAGCGGGCCTTGGTTTAACCATTAGTCGCCAATTGCTGGAGTTAATGGGTGGTCGCCTGTATGTCAGCAG
TCAGCCAATGGTGGGAACTACCTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGT
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATAGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGCACAAAGCCACAAACCCGCACTGATTTTGCTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGCCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCCTTGGGGCAAGTGAAAGATCGCGTTAAAGGTTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAACTTACCGCACGTATAAAAGCCCATCTTCAAGCGGGGAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CTCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGACTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAATTATTTAAACG
CACCCCAGAGCAATTGGAACGCCACTCTATCGATGAACTACTGCTAACCCACCTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTTGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGTACA
ACGCTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.938	100	0.589