Detailed information NTG0563009

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L6L55_RS01850
• Genome accession: NZ_CP091700
• Coordinates: 199779..200804 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KFu019
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 194779..205804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L55_RS01820 (L6L55_01820)	zapB	194863..195108 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L6L55_RS01825 (L6L55_01825)	rraA	195193..195678 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L6L55_RS01830 (L6L55_01830)	menA	195771..196697 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L6L55_RS01835 (L6L55_01835)	hslU	196764..198095 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L6L55_RS01840 (L6L55_01840)	hslV	198105..198635 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L6L55_RS01845 (L6L55_01845)	ftsN	198728..199687 (-)	960	WP_000068828.1	cell division protein FtsN	-
L6L55_RS01850 (L6L55_01850)	cytR	199779..200804 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L6L55_RS01855 (L6L55_01855)	priA	200960..203158 (-)	2199	WP_214142444.1	primosomal protein N'	Machinery gene
L6L55_RS01860 (L6L55_01860)	rpmE	203361..203573 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L6L55_RS01865 (L6L55_01865)	-	203628..204251 (-)	624	WP_000720774.1	TIGR02117 family protein	-
L6L55_RS01870 (L6L55_01870)	yiiX	204258..204866 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
L6L55_RS01875 (L6L55_01875)	metJ	205050..205367 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=563009 L6L55_RS01850 WP_000644904.1 199779..200804(-) (cytR) [Escherichia coli strain KFu019]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=563009 L6L55_RS01850 WP_000644904.1 199779..200804(-) (cytR) [Escherichia coli strain KFu019]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTTACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628