Detailed information NTG0562977

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6L65_RS18435
• Genome accession: NZ_CP091691
• Coordinates: 3806278..3807261 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain KMi006
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3801278..3812261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L65_RS18420 (L6L65_18425)	dppA	3802421..3804028 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
L6L65_RS25160	-	3804062..3804172 (-)	111	Protein_3612	hypothetical protein	-
L6L65_RS18425 (L6L65_18430)	dppB	3804336..3805355 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L6L65_RS18430 (L6L65_18435)	dppC	3805365..3806267 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6L65_RS18435 (L6L65_18440)	amiE	3806278..3807261 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6L65_RS18440 (L6L65_18445)	dppF	3807258..3808262 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6L65_RS18445 (L6L65_18450)	yhjV	3808292..3809563 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
L6L65_RS18450 (L6L65_18455)	ldrD	3810039..3810146 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
L6L65_RS18455 (L6L65_18460)	bcsG	3810233..3811912 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
L6L65_RS18460 (L6L65_18465)	bcsF	3811909..3812100 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=562977 L6L65_RS18435 WP_001196486.1 3806278..3807261(+) (amiE) [Escherichia coli strain KMi006]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=562977 L6L65_RS18435 WP_001196486.1 3806278..3807261(+) (amiE) [Escherichia coli strain KMi006]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404