Detailed information NTG0562904

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6L54_RS22055
• Genome accession: NZ_CP091682
• Coordinates: 4514643..4515626 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain KKo003
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4509643..4520626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L54_RS22030 (L6L54_22030)	bcsF	4509804..4509995 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
L6L54_RS22035 (L6L54_22035)	bcsG	4509992..4511671 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
L6L54_RS22040 (L6L54_22040)	ldrD	4511758..4511865 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L54_RS22045 (L6L54_22045)	yhjV	4512341..4513612 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
L6L54_RS22050 (L6L54_22050)	dppF	4513642..4514646 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6L54_RS22055 (L6L54_22055)	amiE	4514643..4515626 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6L54_RS22060 (L6L54_22060)	dppC	4515637..4516539 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6L54_RS22065 (L6L54_22065)	dppB	4516549..4517568 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
L6L54_RS22070 (L6L54_22070)	dppA	4517875..4519482 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=562904 L6L54_RS22055 WP_001540025.1 4514643..4515626(-) (amiE) [Escherichia coli strain KKo003]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=562904 L6L54_RS22055 WP_001540025.1 4514643..4515626(-) (amiE) [Escherichia coli strain KKo003]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404