Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   H175_RS05945 Genome accession   NC_020376
Coordinates   1186865..1187041 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar thuringiensis str. IS5056     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181865..1192041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H175_RS05925 (H175_ch1118) clpC 1182196..1184796 (+) 2601 WP_000365411.1 ATP-dependent chaperone ClpB Regulator
  H175_RS05930 (H175_ch1119) - 1184835..1185017 (-) 183 WP_001211116.1 YjzD family protein -
  H175_RS05935 (H175_ch1120) - 1185174..1185908 (+) 735 WP_000028688.1 hydrolase -
  H175_RS05940 (H175_ch1121) - 1185938..1186810 (+) 873 WP_000487723.1 NAD(P)-dependent oxidoreductase -
  H175_RS05945 (H175_ch1122) comZ 1186865..1187041 (+) 177 WP_001986215.1 ComZ family protein Regulator
  H175_RS05950 (H175_ch1124) fabH 1187273..1188205 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  H175_RS05955 (H175_ch1125) fabF 1188237..1189475 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  H175_RS05960 (H175_ch1126) - 1189582..1190370 (+) 789 WP_000513281.1 DUF2268 domain-containing putative Zn-dependent protease -
  H175_RS05965 (H175_ch1127) - 1190515..1191261 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=56282 H175_RS05945 WP_001986215.1 1186865..1187041(+) (comZ) [Bacillus thuringiensis serovar thuringiensis str. IS5056]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=56282 H175_RS05945 WP_001986215.1 1186865..1187041(+) (comZ) [Bacillus thuringiensis serovar thuringiensis str. IS5056]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment