Detailed information NTG0562753

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L6L66_RS00230
• Genome accession: NZ_CP091677
• Coordinates: 38178..39203 (-)
• Length: 341 a.a.
• NCBI ID: WP_032238166.1
• Uniprot ID: -
• Organism: Escherichia coli strain KFu022
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 33178..44203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L66_RS00200 (L6L66_00200)	zapB	33262..33507 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L6L66_RS00205 (L6L66_00205)	rraA	33592..34077 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L6L66_RS00210 (L6L66_00210)	menA	34170..35096 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L6L66_RS00215 (L6L66_00215)	hslU	35163..36494 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L6L66_RS00220 (L6L66_00220)	hslV	36504..37034 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L6L66_RS00225 (L6L66_00225)	ftsN	37127..38086 (-)	960	WP_071598226.1	cell division protein FtsN	-
L6L66_RS00230 (L6L66_00230)	cytR	38178..39203 (-)	1026	WP_032238166.1	DNA-binding transcriptional regulator CytR	Regulator
L6L66_RS00235 (L6L66_00235)	priA	39359..41557 (-)	2199	WP_001295520.1	primosomal protein N'	Machinery gene
L6L66_RS00240 (L6L66_00240)	rpmE	41760..41972 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L6L66_RS00245 (L6L66_00245)	-	42027..42650 (-)	624	WP_000720774.1	TIGR02117 family protein	-
L6L66_RS00250 (L6L66_00250)	yiiX	42657..43265 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
L6L66_RS00255 (L6L66_00255)	metJ	43449..43766 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37849.81 Da
• Isoelectric Point: 6.3842

>NTDB_id=562753 L6L66_RS00230 WP_032238166.1 38178..39203(-) (cytR) [Escherichia coli strain KFu022]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQTKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=562753 L6L66_RS00230 WP_032238166.1 38178..39203(-) (cytR) [Escherichia coli strain KFu022]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGACAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625