Detailed information NTG0562738

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6L68_RS22400
• Genome accession: NZ_CP091673
• Coordinates: 4400253..4401236 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain KKo009
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4395253..4406236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L68_RS22370 (L6L68_22365)	-	4395919..4396026 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L68_RS22375 (L6L68_22370)	-	4396402..4396509 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L68_RS22380 (L6L68_22375)	-	4396885..4396992 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L68_RS22385 (L6L68_22380)	-	4397368..4397475 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L68_RS22390 (L6L68_22385)	yhjV	4397951..4399222 (+)	1272	WP_001318103.1	aromatic amino acid transport family protein	-
L6L68_RS22395 (L6L68_22390)	dppF	4399252..4400256 (-)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6L68_RS22400 (L6L68_22395)	amiE	4400253..4401236 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6L68_RS22405 (L6L68_22400)	dppC	4401247..4402149 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6L68_RS22410 (L6L68_22405)	dppB	4402159..4403178 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
L6L68_RS22415 (L6L68_22410)	dppA	4403486..4405093 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=562738 L6L68_RS22400 WP_001196486.1 4400253..4401236(-) (amiE) [Escherichia coli strain KKo009]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=562738 L6L68_RS22400 WP_001196486.1 4400253..4401236(-) (amiE) [Escherichia coli strain KKo009]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGGGAGTCTGGCTCCGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTTGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTTGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404