Detailed information NTG0562671

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L6L68_RS01330
• Genome accession: NZ_CP091673
• Coordinates: 27552..28577 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KKo009
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 22552..33577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L68_RS01300 (L6L68_01300)	zapB	22636..22881 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L6L68_RS01305 (L6L68_01305)	rraA	22966..23451 (-)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
L6L68_RS01310 (L6L68_01310)	menA	23544..24470 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L6L68_RS01315 (L6L68_01315)	hslU	24537..25868 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
L6L68_RS01320 (L6L68_01320)	hslV	25878..26408 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L6L68_RS01325 (L6L68_01325)	ftsN	26501..27460 (-)	960	WP_000068818.1	cell division protein FtsN	-
L6L68_RS01330 (L6L68_01330)	cytR	27552..28577 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L6L68_RS01335 (L6L68_01335)	priA	28733..30931 (-)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
L6L68_RS01340 (L6L68_01340)	rpmE	31134..31346 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L6L68_RS01345 (L6L68_01345)	yiiX	31407..32015 (-)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
L6L68_RS01350 (L6L68_01350)	metJ	32075..32392 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=562671 L6L68_RS01330 WP_000644904.1 27552..28577(-) (cytR) [Escherichia coli strain KKo009]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=562671 L6L68_RS01330 WP_000644904.1 27552..28577(-) (cytR) [Escherichia coli strain KKo009]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628