Detailed information NTG0562506

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6L56_RS00945
• Genome accession: NZ_CP091664
• Coordinates: 212392..213375 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain KKa019
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 207392..218375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L56_RS00930 (L6L56_00930)	dppA	208692..210299 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
L6L56_RS00935 (L6L56_00935)	dppB	210450..211469 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L6L56_RS00940 (L6L56_00940)	dppC	211479..212381 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6L56_RS00945 (L6L56_00945)	amiE	212392..213375 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6L56_RS00950 (L6L56_00950)	dppF	213372..214376 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6L56_RS00955 (L6L56_00955)	yhjV	214406..215677 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
L6L56_RS00960 (L6L56_00960)	-	216153..216260 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L56_RS00965 (L6L56_00965)	-	216637..216744 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6L56_RS00970 (L6L56_00970)	-	217120..217227 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=562506 L6L56_RS00945 WP_001196487.1 212392..213375(+) (amiE) [Escherichia coli strain KKa019]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=562506 L6L56_RS00945 WP_001196487.1 212392..213375(+) (amiE) [Escherichia coli strain KKa019]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407